Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq35 107 3e-18 >seq35 Length=115666 Score = 107 bits (118), Expect = 3e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | |||||| ||||| || ||||| || |||| ||||| | || || || Sbjct 64727 AACAGCAGGCAGGCAAAGTCGGTGTGCAGGCCTTCGTCTCGGCTAATCAGCTCATTCGAG 64668 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || || ||||| ||||| ||||| || |||||||| |||| ||||| || ||| Sbjct 64667 AAGGTCAGGCCGGGCATCAGACCGCGCTTCTTCAGCCAAAAGATGGACGCAAACGAGCCA 64608 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAA 39761 || ||||||||||| || || || ||||| |||| Sbjct 64607 GAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAA 64574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686902214261880