Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq23 172 6e-38 seq35 95.1 1e-14 >seq23 Length=147171 Score = 172 bits (190), Expect = 6e-38 Identities = 527/807 (65%), Gaps = 21/807 (3%) Strand=Plus/Plus Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGA 104288 ||||| | ||||| || ||| ||||||| || || |||||| || ||| | | |||| Sbjct 139032 ACATGCTGATGCGTGTCGCCGTCGGTATCCACGGCCGAGACATCGACGCTGCCATCGAGA 139091 Query 104289 CATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 ||||| || |||||| | | ||| |||| || || | || || |||||||| || Sbjct 139092 CATACAACCTGATGTCGGAGAAGTAC-TTCACACATGCCTCGCCCACTCTCTTCAACGCC 139150 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 || ||||| | || || |||| |||||||| || ||| ||||| ||||| ||| Sbjct 139151 GGCACACCCAACCCTCAGCTGTCTTCGTGCTTCCTGGTCACCATGAAGGACGACTCCATC 139210 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 | |||||||| | || || | | || || || ||| || || |||||| Sbjct 139211 GAAGGTATCTACGACACCCTCAAGACCTGCGCCATGATAAGCAAGACTGCCGGTGGTATT 139270 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACAAATGGTC 104525 || | |||| || | | | || | ||| || ||| ||| || || || Sbjct 139271 GGTCTCAACATTCACTGCATCCGTGGCACTGG--CTCCTACATCGCGGGCACCAACGGCT 139328 Query 104526 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATC 104585 || | || ||| | || ||||| || || | ||| ||| || || || || | | Sbjct 139329 TCTCCAACGGGATTGTGCCCATGCTGCGAGTCTACAACAACACCGCTCGATACGTCGACC 139388 Query 104586 AAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGG 104639 ||| ||| ||||| || | | || |||| ||||||| |||||| | | Sbjct 139389 AAGGTGGCAACAAGCGTCCC---GGCGCCTTTGCCATCTACGTTGAGCCCTGGCACTCTG 139445 Query 104640 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCG 104699 | || | |||||||| || | || ||||| || | ||||||| || || | Sbjct 139446 ACGTCTTCGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGAGCTCGAG 139505 Query 104700 ATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCA 104759 | ||||||| ||||||||||||||| || | |||||||||||||| || ||| ||| Sbjct 139506 AGCTCTTCTACGCTCTCTGGATTCCCGACTTGTTCATGAAGAGAGTCGAACAGAACGGCG 139565 Query 104760 ATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---GGTGAGG 104816 | |||||||| | || || || || || |||||| |||| |||| || |||| Sbjct 139566 AGTGGTCTCTGATGTGCCCCAACGAGTGCCCCGGTCTCGCCGA---CGTGTACGGCGAGG 139622 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| || ||||| ||| ||||||||| | ||||| ||| | || | | Sbjct 139623 AGTTCGAGGCCCTCTACGAGAAGTACGAGAAGGAAGGCAAGGCCCGTCGCACCATCAAGG 139682 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | || || ||| || | || ||||||||||| | || | ||||| Sbjct 139683 CTCAAAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGCAATCCCTTCATGC 139742 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| ||||| |||| ||| || || ||||| | ||| |||||| | | Sbjct 139743 TCTACAAGGACGCTGCCAACCGCAAGTCCAACCAGAAGAACCTCGGTACCATCAAGTGCT 139802 Query 104997 CCAATCTCTGTACAGAAATCTTGGAAT 105023 |||| | || || || ||| | |||| Sbjct 139803 CCAACTTGTGCACTGAGATCATCGAAT 139829 >seq35 Length=115666 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 ||||||||||| || | || ||||| || ||||| |||||||||||||| || || Sbjct 64558 TTTGCTGAGCGCCTGATTGCCTTTGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTT- 64616 Query 94858 TGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 |||| | || | |||||| |||||||| ||||| ||||| || || |||||| || || Sbjct 64617 TGCGTCCATCTTTTGGCTGAAGAAGCGCGGTCTGATGCCCGGCCTGACCTTCTCGAATGA 64676 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||| || || ||||| || || ||| || ||||| Sbjct 64677 GCTGATTAGCCGAGACGAAGGCCTGCACACCGACTTTGC 64715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583255207987080