Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq23 212 7e-50 seq32 161 1e-34 seq4 152 6e-32 seq119 138 1e-27 seq142 132 5e-26 seq25 123 3e-23 seq35 93.3 5e-14 >seq23 Length=147171 Score = 212 bits (234), Expect = 7e-50 Identities = 709/1098 (65%), Gaps = 39/1098 (4%) Strand=Plus/Minus Query 80683 GCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACG 80742 |||| ||| |||||| | | ||||| |||||||| | || || || || | || Sbjct 140112 GCCTCGGGGCTGTCGAAAGCATATCCCATGATCATGAAGGCATCGGCGAGACCGTTGACA 140053 Query 80743 CCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAG 80802 ||||| | || || |||||||| ||| || || ||||| |||| ||||| || Sbjct 140052 CCGATACCAATGGGACGGTGGCGGAAGTTGGACTTCTTAGCCTCGGGAACGGGGTAGTAG 139993 Query 80803 TTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTC 80862 || | ||||||| ||||| ||||| |||||| || || ||||| || ||| Sbjct 139992 TTGATGTCGATGATCTTGTTCAAGTTGCCGCAGACAACCTTGGTGACCTCATGGAGCTTC 139933 Query 80863 TGAAAGTCGAAT---------------TGGTTCCCCT---TCACAAATGCCGGAAGGCTC 80904 | |||||| || ||||| | | | | | | || ||| | Sbjct 139932 TTGAAGTCGTATGTGCGGGTGTTGGTTTGGTTGTCGTAGTTGATGTAGGAGGGGAGGGCC 139873 Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 | | |||| ||||| || || ||||| |||| | | | | |||| ||| || ||| Sbjct 139872 ATGCTAGCCAAGTTGCAGACAGCGACCTCATCAGGAGCACTGTATTCGATGATCTCAGTG 139813 Query 80965 CACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCG 81024 ||||| || || |||| || ||||| ||||| |||||||| |||||| |||| |||| Sbjct 139812 CACAAGTTGGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTTGCGGTTGGCAGCG 139753 Query 81025 TCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAA 81084 ||||||||| |||| | || | || |||||| ||| | || ||||||||||| ||| Sbjct 139752 TCCTTGTAGAGCATGAAGGGATTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAG 139693 Query 81085 ATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCT 81144 | || | ||||||| ||| |||||||| | | ||||| |||| Sbjct 139692 AGCTTTTGAGCCTTGATGGTGCGACGGGCCTTGCCTTCCTTCTCGTACTTCTCGTAGAGG 139633 Query 81145 TCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 | ||||||| | |||| | || | ||| | ||||||||||| ||||||||||| Sbjct 139632 GCCTCGAACTCCTCGCCGTACACGTCGGCGAGACCGGGGCACTCGTTGGGGCACATCAGA 139573 Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264 ||| ||| || | || || ||||||||| ||| || |||||||| ||| | Sbjct 139572 GACCACTCGCCGTTCTGTTCGACTCTCTTCATGAACAAGTCGGGAATCCAGAGAGCGTAG 139513 Query 81265 AACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGT 81322 || || || || ||| || ||||||| | || ||||| ||| | ||||| || | Sbjct 139512 AAGAGCTCTCG--AGCTCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACT 139455 Query 81323 CCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG----- 81377 | | || ||| | ||||| ||||| | || | ||| | | || | |||| Sbjct 139454 CGAAGACGTCAGAGTGCCAGGGCTCAACGTAGATGGCAAAGGCGCC---GGGACGCTTGT 139398 Query 81378 -GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATAC 81436 |||||| |||| |||||| || || || ||| | || |||| ||| || | || | Sbjct 139397 TGCCACCTTGGTCGACGTATCGAGCGGTGTTGTTGTAGACTCGCAGCATGGGCACAATCC 139338 Query 81437 CATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGC--TGAT 81494 | | || ||||| || ||| |||| || || || | || | ||| ||| Sbjct 139337 CGTTGGAGAAGCCGTTGGTGCCCGCGATGTAGGAGCCAGTGCCACGGA---TGCAGTGAA 139281 Query 81495 TG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCAT 81553 || ||||| || ||||| | ||| ||| || || || | ||| || | Sbjct 139280 TGTTGAGACCAATACCACCGGCAGTCTTGCTTATCATGGCGCAGGTCTTGAGGGTGTCGT 139221 Query 81554 AAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGC 81613 | || || |||||| || | |||||| | || ||| || |||| ||||||| Sbjct 139220 AGATACCTTCGATGGAGTCGTCCTTCATGGTGACCAGGAAGCACGAAGACAGCTGAGGGT 139161 Query 81614 TTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCA 81673 | || |||||| ||||| || || || | || || |||| || | ||||||| Sbjct 139160 TGGGTGTGCCGGCGTTGAAGAGAGTGGGCGAGGCATGTGTGAAGTACTTCTCCGACATCA 139101 Query 81674 GGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGC 81732 ||| || || || || | |||| | || || ||||| ||||||| || |||||| Sbjct 139100 GGTTGTATGTCTCGATGGCAGCGTCG-ATGTCTCGGCCGTGGATACCGACGGCGACACGC 139042 Query 81733 ATAAACATGTACTGGGGC 81750 || | ||||| || ||| Sbjct 139041 ATCAGCATGTGTTGCGGC 139024 >seq32 Length=118755 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || ||||||||||||||||| || ||||| || || Sbjct 111472 ATGCAAATCTTCGTAAAGACTCTCACCGGCAAGACTATTACCCTCGAGGTCGAATCTTCC 111413 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || || ||||||||||| ||||| || ||||| Sbjct 111412 GACACCATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCGGACCAA 111353 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| |||||||| | ||| || || ||| ||||| || Sbjct 111352 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTGAGC-GACTACAA 111294 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || || ||||| Sbjct 111293 CATCCAGAAGGAGTCCACTCTCCACCTCGTCCTCCGCCTCCGTGGTGG 111246 >seq4 Length=308026 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || |||||||| || || ||||| ||||| Sbjct 60335 ATGCAGATTTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTCGAGGTGGAGTCCTCC 60394 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 60395 GACACCATCGACAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 60454 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| ||||| || | ||||| || Sbjct 60455 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACTCTTTCGGACTACAAC 60514 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | || || || ||||| Sbjct 60515 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTTCGCCTGCGTGGTGG 60561 >seq119 Length=54761 Score = 138 bits (152), Expect = 1e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 27417 TGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGC 27476 ||| ||||| | ||||||||||| || ||||| ||||||||||| || | ||||| Sbjct 54563 TGTTAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTTGAGTCCTCCGACACCATTGA 54622 Query 27477 AAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAAT 27536 ||| | ||| | || ||||||||||||||||| |||||||| ||||| || || || || Sbjct 54623 CAATGTCAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAACGCCTGAT 54682 Query 27537 TTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGA 27596 ||| || || ||||| || || || | || || || | ||||| || |||| ||||| Sbjct 54683 TTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACTCTTTCCGACTACAACATCCAGAAGGA 54742 Query 27597 ATCCACTCTTCATCTAGTC 27615 ||||| || || || ||| Sbjct 54743 GTCCACCCTCCACCTTGTC 54761 >seq142 Length=44629 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || || || || || ||||| Sbjct 44496 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCG 44437 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 44436 GACACTATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 44377 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| || || || | || || || | ||||| ||| Sbjct 44376 CAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGCACTCTCTCCGACTACAAT 44317 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | || ||||| || ||||| ||||| || | | ||||| || || ||| Sbjct 44316 ATTCAGAAGGAGTCGACTCTGCATCTTGTTCTCAGACTTCGTGGAGGTCAA 44266 >seq25 Length=137175 Score = 123 bits (136), Expect = 3e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || || ||||| ||||| || | ||||| Sbjct 84238 GTCAAGACCCTCACCGGGAAGACGATCACCCTCGAGGTGGAGTCCTCCGACACCATTGAC 84179 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || || || ||||||||||| |||||||| ||||| || ||||| || Sbjct 84178 AACGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAACGTCTGATC 84119 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| |||||||| | || || || | || || || |||| ||||| Sbjct 84118 TTCGCCGGCAAGCAGCTCGAGGACGGCCGAACGCTCTCCGATTACAACATCCAGAAGGAG 84059 Query 27598 TCCACTCTTCATCTAGTC 27615 ||||| || || || ||| Sbjct 84058 TCCACCCTCCACCTCGTC 84041 >seq35 Length=115666 Score = 93.3 bits (102), Expect = 5e-14 Identities = 336/518 (65%), Gaps = 21/518 (4%) Strand=Plus/Plus Query 64627 CTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGG 64686 |||||| || || ||||| | |||| || | |||| || || ||||| ||||| Sbjct 64474 CTGTTCGACGCCATCGAGACCATTCCCGTCGTCAAGCAAAAAGCCGAGTGGGCTATCCGA 64533 Query 64687 TGGATGA---ATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAA 64743 ||||| | | |||| | |||| | |||| || || ||||| || || Sbjct 64534 TGGATCAGCGACACCCAGTCGACATTTGCTGAGCGCCTGATTGCCTTTGCTGCCGTCGAG 64593 Query 64744 GGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATG 64803 || || ||||| ||||| || || || || || ||||| || ||||| || |||||| Sbjct 64594 GGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTTTGGCTGAAGAAGCGCGGTCTGATG 64653 Query 64804 CCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTT 64863 || || ||| | || ||||| |||||||| || ||||| || || ||| || ||| Sbjct 64654 CCCGGCCTGACCTTCTCGAATGAGCTGATTAGCCGAGACGAAGGCCTGCACACCGACTTT 64713 Query 64864 GCGGTTACC--CTGTTCAGCCACCTCAAGGACAAACCATCACAT---GGGACTATAATTG 64918 || | || |||||| ||||||||||| || | ||||| | |||| | | Sbjct 64714 GCC--TGCCTGCTGTTCGGCCACCTCAAG---AAGCGCCCACATCCCGAGACTGTGCTGA 64768 Query 64919 ATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTCATTACTGCCGCGCTTCC-GTGT 64977 || | | ||| || |||||| | | ||| | || | || || || || | Sbjct 64769 GAATCATTAGCGAGGCGGTGACCATTGAACAAGCTTTCCTGACCGATGCTCTGCCAGTAT 64828 Query 64978 CGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGC 65037 | || ||||||||| | ||| ||||| ||||| ||||| ||||| || || || Sbjct 64829 C-ACTGATCGGCATGAACGCCCGGCTGATGACTCAGTACATCGAGTTTGTTGCCGACCGT 64887 Query 65038 CTGCTTACTCAGTTTGGTA---TTAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGG 65094 || || | | |||||| |||| |||| ||| | | || || || |||| Sbjct 64888 CTACTGGTTTCGCTTGGTAACGAGAAGCACTAC---AATGCGACGAACCCCTTCGACTTT 64944 Query 65095 ATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTT 65132 ||||||| || ||| | |||||||| ||||| || Sbjct 64945 ATGGAGAACATTTCTCTGCAAGGGAAGACGAACTTCTT 64982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304932149040