Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20horrida_20[genbank_20GCA_5F001006505.1_202015-05-14] 767 sequences; 20,105,270 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq142 109 5e-19 seq119 107 2e-18 seq25 105 6e-18 >seq142 Length=44629 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || ||||| || | || Sbjct 44496 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCG 44437 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || || || ||| Sbjct 44436 GACACTATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 44377 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | |||||| | || | ||||| ||||| Sbjct 44376 CAGCGCCTCATCTTCGCCGGAAAGCAGCTTGAAGACGGCCGCACTCTCTCCGACTACAAT 44317 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| ||||||||||| | ||| | ||| Sbjct 44316 ATTCAGAAGGAGTCGACTCTGCATCTTGTT 44287 >seq119 Length=54761 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 26999 TGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGA 27058 ||| || || ||||||||||| | || ||||| || || || | |||||| | ||||| Sbjct 54563 TGTTAAGACCTTGACCGGCAAGACCATCACTCTCGAGGTTGAGTCCTCCGACACCATTGA 54622 Query 27059 GATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAAT 27118 | ||||| || ||||| ||||| || ||||| || || || ||||| || | || Sbjct 54623 CAATGTCAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAACGCCTGAT 54682 Query 27119 ATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGA 27178 | ||||||||| || | |||||| | || ||||||| |||||||| || ||||| Sbjct 54683 TTTCGCCGGCAAGCAGCTTGAAGACGGCCGCACTCTTTCCGACTACAACATCCAGAAGGA 54742 Query 27179 GTCGACC 27185 ||| ||| Sbjct 54743 GTCCACC 54749 >seq25 Length=137175 Score = 105 bits (116), Expect = 6e-18 Identities = 137/187 (73%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || ||||| ||| | || || || || ||||| | |||||| | ||||| Sbjct 84238 GTCAAGACCCTCACCGGGAAGACGATCACCCTCGAGGTGGAGTCCTCCGACACCATTGAC 84179 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || |||||||| || ||||| || || || ||||| ||| | || Sbjct 84178 AACGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAACGTCTGATC 84119 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAACATTCAAAAGGA 27178 | ||||||||| || | || ||| | ||| || | |||||||||||||| || ||||| Sbjct 84118 TTCGCCGGCAAGCAGCTCGAGGACGGC-CGAACGCTCTCCGATTACAACATCCAGAAGGA 84060 Query 27179 GTCGACC 27185 ||| ||| Sbjct 84059 GTCCACC 84053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434914230219840