Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1112 102 2e-16 seq47 102 2e-16 >seq1112 Length=124996 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 319804 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 319861 ||||| || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 23697 TCGGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 23640 Query 319862 ACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTG 319921 | || || | ||| |||||| ||| |||||||| ||||| || || || | ||||| Sbjct 23639 AACCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTGC 23580 Query 319922 GCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAA 319981 | ||||| |||||||| |||| || || || ||| || | | |||| ||||||| Sbjct 23579 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 23520 Query 319982 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 23519 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 23471 >seq47 Length=87938 Score = 102 bits (112), Expect = 2e-16 Identities = 283/428 (66%), Gaps = 6/428 (1%) Strand=Plus/Minus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 ||||||||||| || || |||| | || || ||||| | || ||||| |||| Sbjct 15685 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTC 15626 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | ||||||| ||||| ||| ||| | ||||| || ||| | || |||||| Sbjct 15625 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 15566 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA--AGC 230350 ||||||| || ||||||||||| || || | | || |||| | |||| | | Sbjct 15565 CTCATCAGCCGAGACGAGGGTCTGCA-CACCGACTTTGCTTGCTTGC-TCTTCAGCCACC 15508 Query 230351 TCCAGAACAAGCTACCATTCGA-GACGGTCAAACAAATCATTACAGAAGCAGTTGAAAAC 230409 || |||| || | ||| | || || | |||||| | || | || | Sbjct 15507 TCAAGAAGCGGCCGCACCCCGATGTCGTTCTG-CGCATCATTGCCGAGTCTGTCACCATT 15449 Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT 230469 || ||| ||| | || ||| |||| ||| | || ||||||||||| |||| Sbjct 15448 GAGCAGGCTTTCCTGACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTT 15389 Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | |||||||||||||| || || ||||| | | || || || || ||||||| Sbjct 15388 ATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAG 15329 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 |||||| | | || ||||| | || |||||| ||| ||||| ||||| ||||| Sbjct 15328 CACTACAACGCCACAAATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACA 15269 Query 230590 AACTTCTT 230597 |||||||| Sbjct 15268 AACTTCTT 15261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057801420085580