Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq47 215 5e-51 seq1377 152 5e-32 seq1001 138 1e-27 seq923 134 1e-26 seq447 131 2e-25 seq136 127 2e-24 >seq47 Length=87938 Score = 215 bits (238), Expect = 5e-51 Identities = 339/480 (71%), Gaps = 4/480 (1%) Strand=Plus/Minus Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 |||| || ||||| || || |||||| | |||||||||||||| |||||||||||| Sbjct 15762 ACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCA 15703 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 || | || || |||| | |||||||||||| ||||| || ||||| ||||| ||| Sbjct 15702 ACGACGAGGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCT 15643 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || ||| ||||||| |||| || ||||||||||| || || ||||||||||| | Sbjct 15642 TCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTC 15583 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 | || ||| ||||||||||||| | | |||||||||||||| ||||||||| || | Sbjct 15582 TCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCT 15523 Query 117192 TGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 |||| |||| || | | |||| ||| | | | ||| | ||| | ||| Sbjct 15522 TGCTCTTCAGCCACCTCAAGAAGCGGCCGCACCCCGATGTCGTTCTGCGCATCATTGCCG 15463 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC-TGCCGGTGCGTCTGCTGGGA 117310 | | ||| |||| |||||| ||||| ||||| || | | || || | | || | || Sbjct 15462 AGTCTGTCACCATTGAGCAGGCTTTCCTGACCGATGCTCTTCCCTGTTCAT-TGATCGGC 15404 Query 117311 CTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGA 117369 | || || || ||| || |||||||| || ||||| ||| | |||||| | | Sbjct 15403 ATGAA-CGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTGGTAGC 15345 Query 117370 GCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | || |||||||||||| | | || || | ||||| ||| | |||||| Sbjct 15344 CCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAACATCTC 15285 Score = 208 bits (230), Expect = 8e-49 Identities = 189/235 (80%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||| | ||||||| | ||||| Sbjct 16157 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 16098 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||||| | ||||||||||||||||| || ||||||| Sbjct 16097 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 16038 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| || ||||||||||||||||| || |||||||| Sbjct 16037 CACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCGG 15978 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| |||||| |||| |||| || ||||| || |||||||||||||| || ||| Sbjct 15977 TTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 15924 >seq1377 Length=3727 Score = 152 bits (168), Expect = 5e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 2571 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 2512 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| |||||||||||| |||||||| Sbjct 2511 GACACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 2452 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 |||||| | |||| ||||||||| ||||| || |||| |||||||| ||||||||| Sbjct 2451 CAACGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAAC 2392 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 || || |||||| |||| || ||| Sbjct 2391 ATTCAAAAGGAGTCCACTCTTCAT 2368 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || || | |||| | | Sbjct 3244 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 3185 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| ||| |||| ||||| ||||||||||| ||||||| || || ||||| Sbjct 3184 CAATGTCAAGACAAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCAT 3125 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| || || || |||| |||||||| ||| ||||||||||||||||| Sbjct 3124 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGA 3065 Query 40881 GGCCACGCTGCA 40892 | |||| ||||| Sbjct 3064 GTCCACACTGCA 3053 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| || ||| | | Sbjct 3027 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAATCATCA 2968 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| ||||||||||| ||||||| Sbjct 2967 GACACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAA 2908 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| || |||||| |||||||||| Sbjct 2907 CAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAAC 2848 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| |||| Sbjct 2847 ATCCAGAAGGAGTCCACATTGCA 2825 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || || || | || Sbjct 2799 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 2740 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | ||||| |||||||| || ||||||| Sbjct 2739 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 2680 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 |||||| | |||| ||| ||||| ||| |||| || | |||||||| ||| |||||| Sbjct 2679 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 2620 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 2619 ATCCAGAAGGAGTCCACTCTTCA 2597 >seq1001 Length=137376 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| || || || || Sbjct 40782 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 40841 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 40842 GACACGATTGACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 40900 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 40901 ACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAA 40960 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || || |||| || || || || Sbjct 40961 CATCCAAAAAGAATCCACCCTCCACCTCGT 40990 >seq923 Length=148606 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || |||||| |||| || || | || Sbjct 98311 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 98252 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | ||||| ||||| | ||||| || || |||||| |||||||| Sbjct 98251 GACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCAG 98192 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 98191 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAAC 98132 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || ||| | ||| || | || || Sbjct 98131 ATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCGCCTGCGTGGTGG 98085 >seq447 Length=69015 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || ||||| ||||| || |||||| |||| ||||| | ||||| | | | Sbjct 19646 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 19587 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| || || || ||| ||||||| || || ||||| Sbjct 19586 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCAT 19527 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| ||||| || |||| ||||||||| ||||||||||||||||||||| Sbjct 19526 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGA 19467 Query 40881 GGCCACGCTGCA 40892 | |||| || || Sbjct 19466 GTCCACTCTTCA 19455 >seq136 Length=82364 Score = 127 bits (140), Expect = 2e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 3884 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 3943 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| |||||||| || ||||||| Sbjct 3944 GACACTATCGACAACG-TGAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 4002 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| || || ||||| Sbjct 4003 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 4062 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 4063 CATCCAGAAGGAGTCAACGCTTCA 4086 Score = 125 bits (138), Expect = 7e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || |||||| | || ||||| | | Sbjct 4112 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCA 4171 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || |||| ||||| |||||||| || ||||||| Sbjct 4172 GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 4231 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 |||||| | |||| ||| ||||| ||||| || |||| || || ||| ||||||||| Sbjct 4232 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACAAC 4291 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| |||||| |||| || ||| Sbjct 4292 ATCCAAAAGGAGTCCACACTTCAT 4315 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 3656 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 3715 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||| || ||||||| Sbjct 3716 GACACCATCGACAACG-TCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 3774 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | ||| || || || || || |||| || |||||| ||||||||| Sbjct 3775 ACAGCGCCTTATTTTCGCCGGAAAGCAACTCGAAGACGGCCGAACCCTCTCCGACTACAA 3834 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| ||||||||| |||| || || Sbjct 3835 CATTCAGAAGGAGTCCACTCTTCA 3858 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || | | |||| | | | Sbjct 3439 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCAGACACCATTGA 3498 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| ||||| ||||| ||||||| || || ||||| Sbjct 3499 CAATGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGCCTCAT 3558 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| || || || |||| |||||||| ||| ||||||||||| ||||| Sbjct 3559 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGA 3618 Query 40881 GGCCACGCTGCA 40892 | |||| ||||| Sbjct 3619 GTCCACACTGCA 3630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208470560160