Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1377 122 7e-23 seq136 116 3e-21 seq447 107 2e-18 seq923 105 5e-18 >seq1377 Length=3727 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||||||||| |||||||| ||| || ||| |||| || Sbjct 3047 ACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 3106 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| || | ||||||||||| ||||| | |||||||||||| | Sbjct 3107 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 3166 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | ||||| ||| ||||| | ||| || |||||| Sbjct 3167 ATCTTTGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 3226 Query 45308 CCCGTCAGAGTCTTCAC 45324 || ||||||||||| || Sbjct 3227 CCAGTCAGAGTCTTGAC 3243 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||| ||| || ||| | || ||| Sbjct 2591 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 2650 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| ||||| || |||||||| ||||| | |||||||||||| Sbjct 2651 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 2710 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||||||||| | || || |||||| Sbjct 2711 ATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 2770 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 2771 CCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| ||| ||||||||| |||||||||||| || || |||| || Sbjct 2819 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 2878 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || ||||||||||| || | ||||||||||| ||||| | ||||||||||| Sbjct 2879 AGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTC 2934 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||| |||||||||||||| || ||| |||| || Sbjct 2363 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 2422 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||| || || ||||| || || | |||||||||||| | Sbjct 2423 AGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 2482 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| |||||||| | || || |||||| Sbjct 2483 ATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTG 2542 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || || || ||||| Sbjct 2543 CCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 >seq136 Length=82364 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| |||||| || |||||||| ||| || ||| |||| || Sbjct 3636 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 3577 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || |||||||| || | ||||||||||| ||||| | ||||||||||||| Sbjct 3576 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGG 3517 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | ||| || |||||| Sbjct 3516 ATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTG 3457 Query 45308 CCCGTCAGAGTCTTCAC 45324 || ||||||||||| || Sbjct 3456 CCAGTCAGAGTCTTAAC 3440 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||||||||||||||||||| || || |||| || Sbjct 3864 ACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCG 3805 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||||||||| || | ||||||||||| ||||| | |||||||||||| Sbjct 3804 AGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 3745 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| || || || | || || |||||| Sbjct 3744 ATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTG 3685 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 3684 CCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||| || ||||||||||| || || |||| || Sbjct 4320 ACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCG 4261 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| ||||| || |||||||| ||||| | |||||||||||| | Sbjct 4260 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 4201 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| || || | ||| || |||||| Sbjct 4200 ATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTG 4141 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 4140 CCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 >seq447 Length=69015 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || |||| |||| || Sbjct 19449 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCG 19508 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || | ||||||||||| || || | ||| ||||||||| Sbjct 19509 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGG 19568 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || || | | | ||| ||| ||||| | ||| ||||||||| Sbjct 19569 ATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 19628 Query 45308 CCCGTCAGAGTCTTCAC 45324 || || || ||||| || Sbjct 19629 CCGGTGAGGGTCTTGAC 19645 >seq923 Length=148606 Score = 105 bits (116), Expect = 5e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || || |||| || || || || |||||||| Sbjct 98120 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 98179 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||| ||||| || || | ||| ||||||||| ||||| ||| || || Sbjct 98180 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 98239 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||| | ||||||||| | ||| || ||||| |||||||| ||||| || Sbjct 98240 GTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGAC 98299 Query 45325 AAAGATTTGCATGTTG 45340 ||||| |||||| || Sbjct 98300 GAAGATCTGCATGCTG 98315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395067178244986