Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1377 107 2e-18 seq923 91.5 1e-13 seq1001 86.0 6e-12 seq136 82.4 7e-11 >seq1377 Length=3727 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || ||||| || | ||| |||||| | ||| | ||||||| Sbjct 2591 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 2650 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || ||| | ||||| |||| ||| || || |||||||| || || ||||| | Sbjct 2651 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 2710 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| || | ||| ||||| | | || || |||| |||||||| || Sbjct 2711 ATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCTTG 2770 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 2771 CCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 ||||||||||| || || ||||| || | ||| || ||| | || ||| | |||| Sbjct 2819 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGG--AGAGGGTTCGGCCGTCCT 2876 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| |||||| | ||||| | | || || || ||||| || || || ||||| | Sbjct 2877 CGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTT 2936 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | |||||| | ||| ||||| | || || || | ||||| || | Sbjct 2937 GGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATTGTCT 2996 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || || || || || || ||||||||||||| Sbjct 2997 TGCCGGTGAGGGTCTTGACGAAGATCTGCATGC 3029 >seq923 Length=148606 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | || ||||| || || || |||||||| ||| Sbjct 98157 TCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTG 98216 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| | |||||||||| ||| | ||| | || || || | ||||| Sbjct 98217 TCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATA 98276 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || || || || || || || |||||||||||||| Sbjct 98277 GTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATGCT 98314 >seq1001 Length=137376 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/200 (70%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 || ||||| ||||| | ||| || ||| |||| ||| | || || ||||| || | Sbjct 40978 GTGGATTCTTTTTGGATGTTGTAGTCGG--ATAGCGTTCGGCCGTCTTCGAGCTGCTTGC 40921 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | ||||| | | ||| || ||||| || || || || ||||| | || || | || Sbjct 40920 CGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCT 40861 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 ||||| | | | ||||| | | || || || | |||||||| || |||||||| | Sbjct 40860 TGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGTAAGGG 40801 Query 94989 TTTTCACAAAGATCTGCATG 95008 | || || |||||||||||| Sbjct 40800 TCTTGACGAAGATCTGCATG 40781 >seq136 Length=82364 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856 ||||| || | || || |||||||| | ||| || || | ||| || | || | Sbjct 4320 ACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCG--TCTT 4263 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || ||| | ||||| |||| ||| || || |||||||| || || ||||| | Sbjct 4262 CGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCT 4203 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || | ||| || | ||| ||||| | ||||| |||| ||||| || | Sbjct 4202 GAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCT 4143 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || || || ||||||||||| Sbjct 4142 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448281864335760