Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1377 95.1 1e-14 seq136 93.3 4e-14 seq1001 86.0 5e-12 >seq1377 Length=3727 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || ||| |||| || ||| || ||||| ||||| | ||||| | Sbjct 3231 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGACAATGTCAAGACA 3172 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 |||||| ||||| || ||||| ||||| || |||||| | || || | || ||||||| Sbjct 3171 AAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCATCTTCGCCGGCAAG 3112 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 |||||||| || | | | | | | |||||| ||||| || || || || ||| | || Sbjct 3111 CAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGAGTCCACACTGCAC 3052 Query 24195 TTAGT 24199 || || Sbjct 3051 TTGGT 3047 >seq136 Length=82364 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || ||| Sbjct 3716 GACACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 3775 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || |||| || ||| |||||||||||||| | | ||| | || ||| || ||| Sbjct 3776 CAGCGCCTTATTTTCGCCGGAAAGCAACTCGAAGACGGCCGAACCCTCTCCGACTACAAC 3835 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||| || || || || |||| || || Sbjct 3836 ATTCAGAAGGAGTCCACTCTTCACTTGGT 3864 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| | ||||||||| | Sbjct 4112 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCA 4171 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| || ||||| ||||| || ||| Sbjct 4172 GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 4231 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || |||| | || ||||||||| |||||||| | | | || || || ||| Sbjct 4232 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACAAC 4291 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| || || ||| ||||||| || Sbjct 4292 ATCCAAAAGGAGTCCACACTTCATTTGGT 4320 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || ||| |||| || ||| | |||||||| || | ||||| Sbjct 3452 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCAGACACCATTGACAATGTCAAGACC 3511 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || || || ||||| || |||||| | || || | || ||||||| Sbjct 3512 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGCCTCATCTTCGCCGGCAAG 3571 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 |||||||| || | | | | | | |||||| ||||| ||||| || || ||| | || Sbjct 3572 CAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGAGTCCACACTGCAC 3631 Query 24195 TTAGT 24199 || || Sbjct 3632 TTGGT 3636 >seq1001 Length=137376 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| || | || ||| |||| || ||| || | Sbjct 40782 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 40841 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| || ||||| || || || ||| Sbjct 40842 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 40901 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | || ||||||||| |||||||| | | ||| | ||| || ||| Sbjct 40902 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 40961 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||||||||| || Sbjct 40962 ATCCAAAAAGAATCCAC 40978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429927270418230