Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1377 136 4e-27 seq136 134 1e-26 seq923 127 2e-24 seq1001 107 2e-18 seq447 105 6e-18 >seq1377 Length=3727 Score = 136 bits (150), Expect = 4e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 131002 CATGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 ||| ||||||| || | ||| || || ||||| | || |||||||||||||||||||| Sbjct 2339 CATTAGCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAG 2398 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || | |||||| ||| || ||||||||||| ||| |||| || || ||||||||| Sbjct 2399 TCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCC 2458 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || || ||||| || ||| ||||| | || | || || | || Sbjct 2459 GGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGAT 2518 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || | ||| || ||||| || || || |||||||||||||| Sbjct 2519 TCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 Score = 129 bits (142), Expect = 6e-25 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || || || || || | || |||||||| || |||||||||||| Sbjct 3028 GCCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGA 3087 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| || |||||||| ||| |||| | |||||| ||||||||||| Sbjct 3088 AAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGG 3147 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||| || || ||||| ||| | | || ||||| | || | ||| || | |||||| | Sbjct 3148 GATGCCCTCCTTGTC-CTGAATCTTTGTCTTGACATTGTCGATAGTGTCCGAGGACTCAA 3206 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 |||| ||| | ||| || || || ||||| || ||| Sbjct 3207 CCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 3244 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || || || | || |||||||| || |||||||||||| Sbjct 2573 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 2632 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | ||||||||| ||| |||| || || || ||||||||||| Sbjct 2633 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 2692 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| | ||| | Sbjct 2693 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACC 2752 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || || ||||| |||||||| Sbjct 2753 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | || |||||||| || |||||||| ||| Sbjct 2801 CCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2860 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||| || ||| |||| | ||||| |||||||||||| Sbjct 2861 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 2920 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | || || | Sbjct 2921 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACT 2980 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || ||||| || || || ||||| ||||||||| Sbjct 2981 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 3028 >seq136 Length=82364 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | || |||||||| || ||||||||||| Sbjct 4110 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 4051 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||||||||| Sbjct 4050 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 3991 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | ||| || | || || | Sbjct 3990 ATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACC 3931 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || || || |||||||||||||| Sbjct 3930 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | || ||||||||||| |||||||||||| Sbjct 3654 CCACCACGCAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 3595 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || |||||||| ||| |||| | ||||| |||||||||||| Sbjct 3594 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGG 3535 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||| | Sbjct 3534 ATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACC 3475 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 |||| ||| | ||| || || || ||||| || ||| Sbjct 3474 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 3439 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | || |||||||| ||||||||||| ||| Sbjct 3882 CCACCGCGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 3823 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || ||||| || ||| | || | ||||| ||||||||||| Sbjct 3822 AGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGGA 3763 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | || || | Sbjct 3762 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCAACT 3703 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || || || ||||| |||||||| Sbjct 3702 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || || ||||| | || ||||||||||| |||||||| || Sbjct 4339 GCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGA 4280 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||| || ||||||||||| ||| |||| || || || ||||||||||| Sbjct 4279 GAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 4220 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || || ||| | | || | || || | ||||||| Sbjct 4219 AATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGAC 4160 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || ||||| || || || ||||| |||||||| Sbjct 4159 TTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 >seq923 Length=148606 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| || |||||||| || Sbjct 98085 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 98144 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | |||||||||||||| ||| Sbjct 98145 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 98204 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| |||||| ||||| | || || | | |||| ||||| | Sbjct 98205 ATACCTTCCTTGTCCTGGATTTTGGTCTTGA-CGGCGTCGATGGAGTCGGAAGACTCCAC 98263 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || ||||| || || || || ||||| ||||||||| Sbjct 98264 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATG 98312 >seq1001 Length=137376 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| || || ||||| |||||||| ||| Sbjct 41008 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 40949 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || ||||||||||| ||| |||| | ||| || ||||| || ||| Sbjct 40948 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 40889 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||| | Sbjct 40888 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 40829 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| ||| | ||| || || || || || || ||||| |||||||||| Sbjct 40828 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATGA 40780 >seq447 Length=69015 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | || |||||||| || |||||||| ||| | |||||| | Sbjct 19443 CGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCG 19502 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | |||||| |||||||| || || ||||| ||| Sbjct 19503 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTG 19562 Query 131140 TCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || ||| || ||||| | || || | | |||| ||||||| |||| ||| | Sbjct 19563 TCCTGGATCTTGGTCTTGA-CGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGAT 19621 Query 131199 GGTTTTACCGGTTAGAGTTTTTACG 131223 || || ||||| || || || ||| Sbjct 19622 CGTCTTGCCGGTGAGGGTCTTGACG 19646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002970333440