Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq47 109 1e-18 seq1256 98.7 2e-15 seq1112 96.9 7e-15 >seq47 Length=87938 Score = 109 bits (120), Expect = 1e-18 Identities = 285/430 (66%), Gaps = 10/430 (2%) Strand=Plus/Plus Query 251566 AAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||| | ||| ||||| |||||||||||||||||| |||||||| Sbjct 15261 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 15320 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 ||||| ||||| | || || ||||| | | ||||| || ||||| || | ||| Sbjct 15321 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 15380 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAAT 251745 || | ||| ||| | ||||||||| |||| ||| |||| || || | ||| Sbjct 15381 TGGCTCATAAGTCGTGCGTTCATGCCGATCAATGAACAGGGAAGAGCATCGGTCAGGAAA 15440 Query 251746 TCCTTTTCGTTGGCAACTGCCTCCTCCACAAT-TGC----CTTCACCTGTGCCAGAGACA 251800 ||| || ||| || | ||| | | || || | || | | | | | | Sbjct 15441 GCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG--TGCGGCC 15498 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||| || | | || || ||| | |||| | ||||||||||||||| | Sbjct 15499 GCTTCTTGAGGTGGCTGAAGAGCA--AGCAAG-CAAAGTCGGTGTGCAGACCCTCGTCTC 15555 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||||| ||||||||| | || || ||||| | ||||| ||| ||||||||| Sbjct 15556 GGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGA 15615 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | | || || || ||||| | | |||||| || | | ||||| |||| Sbjct 15616 AGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAAGGCAACCAGGC 15675 Query 251981 GCTCAGCAAA 251990 |||| ||||| Sbjct 15676 GCTCGGCAAA 15685 >seq1256 Length=115194 Score = 98.7 bits (108), Expect = 2e-15 Identities = 175/247 (71%), Gaps = 14/247 (6%) Strand=Plus/Plus Query 293127 GACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGA 293186 || ||||||||| || || ||||| | ||| || | |||| |||||||||||| Sbjct 73876 GATAAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACAC 73935 Query 293187 TGTCTTGTACACTGCCTTGACATCAGG--ATGAATGCCAATAACCTTCTGGATAGACCCT 293244 ||||||||||| ||||||| || || ||||||| || |||||||| || || Sbjct 73936 TGTCTTGTACAGTGCCTTG--ATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCG 73993 Query 293245 CCGTTGGCAATAATCTGGTTCTTCAT-TGTCTCGGACCA-AGTCC---CACGAGCAATGA 293299 |||| ||| || || |||||||||| ||| ||| ||| || || | ||| || | Sbjct 73994 CCGTGGGCTATGATGCGGTTCTTCATCTGT-TCGTTCCACAGACCTTGCTCGA-CA---A 74048 Query 293300 GCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGT 293359 |||| || | || ||| |||||| || ||||||| || ||||| || ||| ||| Sbjct 74049 GCTCACGCAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGT 74108 Query 293360 AAATGTT 293366 ||| ||| Sbjct 74109 AAAGGTT 74115 >seq1112 Length=124996 Score = 96.9 bits (106), Expect = 7e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||| ||||| | ||||| ||||| || |||| |||||||| || ||| Sbjct 23471 GGTGAGGACTTGTGCAACTGTCAGTTCTCTCTCGCCTACGGTGCCAAGATTCTTCTCAAC 23530 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||||| |||| || |||||| || | ||| || | Sbjct 23531 ACCGCCACTCTCCGCCTCAAGCGTGGTCACCGTTACGGTCTCTGTGGCCGCAACGGTTCC 23590 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || |||||||||||| ||||||||| | || || || ||| | Sbjct 23591 GGCAAGTCTACCCTCATGCGCGCCATTCAGAACGGTCAGGTCGAGGGTTTCCCTTCGCCC 23650 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGA 279562 ||||| | ||| ||| || |||||||| |||| Sbjct 23651 GACGAGGTTCGCACATGGTACGTCGAGCACGATCTCGA 23688 Score = 96.9 bits (106), Expect = 7e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| || || |||| || || ||| || || ||||| Sbjct 24302 GGTCCCAACGGTTCCGGCAAGTCGACGCTCGTCAAGCTCATGGTTGGTGACACAGAGGCC 24361 Query 280239 ACTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGC 280297 | ||| ||| | | |||||||| |||||| || || | |||||||| || ||||| Sbjct 24362 AA-GAGTGGTGAGGTGTGGAAGCACCCCAACTTGGTTATCGGATACGTCGCCCAACACGC 24420 Query 280298 TTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 ||||||||||||||| | ||| |||||| ||| ||| | | ||||| |||||| || Sbjct 24421 TTTCCACCACATCGACCAGCACTTGGACAAGACCCCTCTCGACTACATGTTGTGGCGATA 24480 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| || | ||||| ||| | ||| ||| || ||||| ||||| ||||||||| Sbjct 24885 GGTCTCGAGCGTGAGTTCACATCGCACAACACCATGCGTGGTCTCTCTGGTGGCCAGAAG 24944 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 ||||| |||| |||| || || |||| | || ||| | |||| ||||||||| Sbjct 24945 GTCAAGATTGTGCTCGGTGCCGCAACATGGCGTAAGCCCCACATTGTCGTCCTCGACGAG 25004 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTG--GGCGCTC 280836 || ||||||| ||||||| ||| |||| ||||||| Sbjct 25005 CCCACCAACTTCTTGGACCGTGAGTCCCTGGCGGCGCTC 25043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027814860181106