Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq136 104 2e-17 seq1001 102 7e-17 seq1377 100 2e-16 seq447 89.7 4e-13 >seq136 Length=82364 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| || || | ||| || || || || ||||||||||| Sbjct 4113 ATACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCA 4054 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || ||||| || || || ||| ||||||| ||||| ||||||||| Sbjct 4053 GAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGA 3994 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | ||||| | ||||| Sbjct 3993 GGAATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCC 3934 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || ||||||||||| Sbjct 3933 ACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || ||||| |||||||| || | |||||| ||||| Sbjct 4320 ACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCG 4261 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| | || |||||||||||||||||||| || ||||| | Sbjct 4260 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 4201 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | || | |||||| | || ||||| || | ||| | || ||| Sbjct 4200 ATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTG 4141 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || || || || |||||||| Sbjct 4140 CCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| || || | || || || || ||||||||||| ||| Sbjct 3885 ATACCACCGCGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCG 3826 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||| ||||| || || ||| | || || ||||||||||||||| Sbjct 3825 GAGAGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGA 3766 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||| | ||||| Sbjct 3765 GGAATGCCCTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCA 3706 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || || |||||||| Sbjct 3705 ACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || ||||| |||||||||||| Sbjct 3657 ATACCACCACGCAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCG 3598 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || ||||| || || ||| ||||||| ||||||||||||||| Sbjct 3597 GAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGA 3538 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||| | || || Sbjct 3537 GGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCA 3478 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || ||||| |||||||| || || Sbjct 3477 ACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 3440 >seq1001 Length=137376 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | || | || | || ||||||||||| |||||||| ||| Sbjct 41009 ACCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGA 40950 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||||| || || || || ||| |||||||||| |||||||| || || Sbjct 40949 TAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGG 40890 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| ||||| || | | |||| ||||||| ||| || || Sbjct 40889 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTAC 40830 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || ||||| || || || || || || ||||||||| Sbjct 40829 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 40781 >seq1377 Length=3727 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || || || | || || || || || |||||||||||| Sbjct 3026 ATGCCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCG 3085 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || ||||| || || ||| ||||||||||||||||||||||| Sbjct 3086 GAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGA 3145 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||||| || | | || | ||||| | ||| || Sbjct 3146 GGGATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATAGTGTCCGAGGACTCA 3205 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || ||||| |||||||| || || Sbjct 3206 ACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 3243 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | || ||||| | || || || |||||||||||||| || Sbjct 2345 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 2404 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||||| || || || || ||| |||| | || || |||||||| || Sbjct 2405 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGG 2464 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| |||||| || | | |||| |||||| | ||||| || Sbjct 2465 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACC 2524 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || |||||||| || || || || ||||||||||| Sbjct 2525 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | || || || || || |||||||| ||| Sbjct 2798 ATACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCG 2857 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| |||| || ||||||||||||||| Sbjct 2858 GAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGA 2917 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | ||||| Sbjct 2918 GGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCA 2977 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || |||||||| || || || || || ||||||||| Sbjct 2978 ACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 3028 >seq447 Length=69015 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || ||| || || || || || || Sbjct 19461 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 19520 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||||||||||||||| ||||| ||||| ||||| ||| || || || Sbjct 19521 GCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATC-TTGGTCTT 19579 Query 114306 AGCTG-TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | || ||||| || ||||| || | ||| | ||| |||||||| || || Sbjct 19580 GACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGT 19639 Query 114365 TTTTAC 114370 || || Sbjct 19640 CTTGAC 19645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420125869433592