Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1256 468 1e-126 seq47 246 6e-60 >seq1256 Length=115194 Score = 468 bits (518), Expect = 1e-126 Identities = 1150/1722 (67%), Gaps = 64/1722 (4%) Strand=Plus/Plus Query 243902 AAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGT 243960 || ||| || || || || |||||| ||||| | ||||||| || ||||| || | || Sbjct 73879 AAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGT 73938 Query 243961 CTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTG 244020 |||||| | | ||||| | | ||||| | || | |||||| | |||||| ||| Sbjct 73939 CTTGTACAGTGCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTG 73998 Query 244021 GACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGAC 244080 | | |||| || | ||| | ||||||||||| || |||| | ||| Sbjct 73999 GGCTATGATGCGGTTCTTCATCTGTTCGTTCCACAGACCTT---GCTCGACAAGCTCACG 74055 Query 244081 CAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT 244137 ||| ||| ||| || || || ||||| || | ||||| || || ||| ||||| Sbjct 74056 CAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTT 74115 Query 244138 GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGG 244197 ||| || ||||| | || ||| || ||| || ||||| || ||||| || Sbjct 74116 GCTCGTGTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGG 74175 Query 244198 CATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGG--ATGCGGAGTCTGAGC 244255 ||| || | | ||| ||| ||| | | ||||| | || ||| | | ||| Sbjct 74176 CATAGGGGCGAGCAGGAGAGAGTTTCGGAGACCGTG--TGCGGCAATGTTGCGCTTGATT 74233 Query 244256 TCGTTCCAGTCCCACATGCCCGAGAGGTCCTC-GCGTTTGAGGCCCCACATGTCAAACTG 244314 ||| ||||||||| | |||| | | | ||| ||||| | || | || Sbjct 74234 TCGGCCCAGTCCCAGA----------GTCCACTGGGAGTGACTCCCCAGAGATCGTATTG 74283 Query 244315 CAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGC 244374 |||| ||||||||| |||||||||||||| ||| ||||| ||| || ||| Sbjct 74284 CAGCTCGCCCTTGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGC 74343 Query 244375 CAGCTTACAGCTCTCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCA 244433 |||| || | ||| ||||| ||||||| |||||| |||||||||||| |||| | Sbjct 74344 GAGCTCGCA-CGATCGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGA 74402 Query 244434 TGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTC 244493 | ||||| | || | ||||| | ||||| |||||||| ||||||| || | Sbjct 74403 GCTTCTTGGCCTCGGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAGAC 74462 Query 244494 CCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGG 244553 | | || ||||| |||||||| | ||| ||| ||||||| | | || ||||| || | Sbjct 74463 CGTTGACTCCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAG 74522 Query 244554 GGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT---GATCATGCGGACGACGT 244610 |||| ||||| | ||||| | |||||||||||||| || | || || ||| Sbjct 74523 GGTAGTAGTTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGT 74582 Query 244611 CGGCCAGCAGCTGAAAGTCGTAC-TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAAC 244669 | ||| || |||||||| || | | | || | |||| | ||| || | Sbjct 74583 GG---AGCTTCTTGAAGTCGTATGTCCTTGTGTTCGTGTGCGA-GTCGATGTGGACGTAA 74638 Query 244670 TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGG 244729 || || | ||||| ||||||||||| || ||||| |||| | |||||| Sbjct 74639 GAAGGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCC 74698 Query 244730 ACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG 244789 | ||||| ||||| |||||| ||||||||||||||| |||| || || || |||||| Sbjct 74699 ATGATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTG 74758 Query 244790 GCGTT-GCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAG 244848 ||| ||| ||||||||||| |||||||| || || ||||| ||| || |||| Sbjct 74759 CGGTTAGCA-GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAG 74817 Query 244849 GACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908 ||| || ||| || | ||||||||| || | |||||| ||||| |||||| Sbjct 74818 AACGGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTA 74877 Query 244909 GCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGC 244968 ||| || |||||||||||| ||| |||| || | || ||||||||| || Sbjct 74878 CTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGC 74937 Query 244969 CGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGAT 245028 |||||||| || |||||| ||| | | ||| | || |||||| | ||| ||||| Sbjct 74938 GGGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGAT 74997 Query 245029 CCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTC 245086 ||| ||||| | |||||| || | || ||| | ||| ||| ||| ||||||||| Sbjct 74998 CCAAAGGGCGTAGAAGAGCTCACGGG--CTCGGACCTCCTCCTTGCCGTGGTTCTTCCTG 75055 Query 245087 AGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCG 245146 || || | || || |||||||| |||||||||||| ||||||| |||| ||| || Sbjct 75056 AGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCT 75115 Query 245147 GGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAG 245202 || ||||||||||| ||||| || | | | |||||| |||||||| ||| || Sbjct 75116 GGACGCTTGTTGCCACCCTGATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAG 75171 Query 245203 GGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCT 245262 ||||||| || ||||||||| ||||| || || ||||| | ||| | || | Sbjct 75172 CATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACG 75231 Query 245263 GAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 || | | |||| | ||| | || || || |||| ||| | ||||||| |||| Sbjct 75232 GATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTT 75291 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 || ||||| ||||| || || ||| ||||||| ||| ||| ||||| || || Sbjct 75292 GAGAGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGA 75351 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCG 245442 || || || ||||| | | | |||||| || |||||| ||| ||||| ||||| | Sbjct 75352 CATTTGAGGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA-CT 75410 Query 245443 GCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGCA 245501 || ||| | || ||| || | || |||||||| ||||||| ||| Sbjct 75411 TCTCCGACATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCC 75468 Query 245502 GGGCGCACCT--CATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTTG-- 245557 | ||| || |||||| |||| ||||| |||| | | || | || ||| Sbjct 75469 GACAGCAACTCGCATGAGCATGTGTTGGGGGCGCTCG--GCGACCTT----GCCGTTGAT 75522 Query 245558 ----AGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 |||| |||||||||||||| |||||||| || ||||| Sbjct 75523 GCGCAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 75564 >seq47 Length=87938 Score = 246 bits (272), Expect = 6e-60 Identities = 417/592 (70%), Gaps = 19/592 (3%) Strand=Plus/Minus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| || || || |||| ||||| | || |||| Sbjct 15841 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 15782 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | || |||||||| || ||| | ||||| | ||||| || Sbjct 15781 CAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAG 15722 Query 42657 TGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||||| || ||||||| | ||| ||| | || || | |||| | ||||| || Sbjct 15721 TGGGCCCTGCGCTGGATCAACGACGAG----GACTCCACCTTTGCCGAGCGCCTGGTTGC 15666 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | ||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||| Sbjct 15665 CTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 15606 Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || |||||||| ||||||||||| ||||| ||||||||| | ||||||| Sbjct 15605 GAAGCGTGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 15547 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCG 42890 | ||||| | |||||||| ||| | || ||| |||||||||| | | ||| | | Sbjct 15546 GTCTGCACACCGACTTTGCTTGCTTGCTCTTC---AGCCACCTCAAGAAGCGGCCGCACC 15490 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 | | | || | | |||||| | ||| | || || ||| ||| ||||| || Sbjct 15489 CCGATGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTGACC 15431 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCA 43009 | | || ||| || || ||||||||||| ||||| || ||| || |||||||| | Sbjct 15430 GATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGA-CTTATGAGCCAGTACATCGA 15372 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 | ||||| |||| || || || | ||| || | | ||||||| | | Sbjct 15371 ATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAG-CACTACAACGCCACAA 15313 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 ||||||||||| ||||||||||||||| || | |||||||| ||||| || Sbjct 15312 ATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 15261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944319534136160