Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1001 147 5e-30 seq136 140 8e-28 seq1377 120 7e-22 seq447 120 7e-22 seq923 116 9e-21 seq1500 96.9 8e-15 >seq1001 Length=137376 Score = 147 bits (162), Expect = 5e-30 Identities = 176/238 (74%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| || | ||| |||||||||||| || ||||||| Sbjct 41008 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 40949 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || |||||||| | || || || |||||||| ||||| ||||| |||||| Sbjct 40948 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGG---TCTGGG 40892 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || | || ||||| || || | ||| || ||| Sbjct 40891 GGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCT 40832 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 || ||||| ||||| ||||| || || || ||||||||||| |||||||| ||| ||| Sbjct 40831 ACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATGATGATAT 40774 >seq136 Length=82364 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | |||| ||| || || || || || ||||||| | Sbjct 3882 CCACCGCGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 3823 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||| ||||| ||||| || || |||||||| || Sbjct 3822 AGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGGA 3763 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | || ||||| ||| Sbjct 3762 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCAACT 3703 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 3702 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||||||||| | || || | ||||| ||| || |||||||| || ||||| Sbjct 4341 TGGCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCA 4282 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| || ||||||||||| | || || || |||||||||| || ||||| Sbjct 4281 GAGAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGA 4222 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || | ||||| || || || | || || || Sbjct 4221 GGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCG 4162 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 4161 ACTTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || | |||| ||| || || ||||| || || || | Sbjct 4110 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 4051 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || || Sbjct 4050 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 3991 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| |||||||| || |||| || ||||| || Sbjct 3990 ATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACC 3931 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 3930 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 100 bits (110), Expect = 7e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || |||| || ||||| ||||| || | ||| || || |||||| Sbjct 3618 TCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 3559 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || |||||||| ||||| || || || |||||||| || | || || || Sbjct 3558 ATGAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTG 3499 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||||||||| ||| Sbjct 3498 TCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 3439 >seq1377 Length=3727 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| || || ||||| || | || ||||| |||||| Sbjct 2837 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 2896 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || |||||||| ||||| || || || || ||||| || | || || || Sbjct 2897 ATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG 2956 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| |||||||| ||||| ||||| ||||| || ||||||||| Sbjct 2957 TCGATCGTGTCTGATGATTCAACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACG 3016 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 3017 AAGATCTGCAT 3027 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||||| ||| || ||||| || || ||||| | Sbjct 2345 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 2404 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||||| || || || ||| Sbjct 2405 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGG 2464 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| || || || || || | || ||||| || Sbjct 2465 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACC 2524 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 2525 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || |||| || ||||| ||||| || | ||| || || |||||| Sbjct 3065 TCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 3124 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| ||||| || || || ||||| || || | || || || Sbjct 3125 ATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATTG 3184 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || ||||| ||||| ||||| || ||||||||||||||| Sbjct 3185 TCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 3244 Score = 100 bits (110), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || ||||| || || |||| Sbjct 2573 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 2632 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||||| || ||||| || Sbjct 2633 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 2692 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| || | || || || || || | || |||| || Sbjct 2693 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTC---TCC 2749 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 2750 ACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 >seq447 Length=69015 Score = 120 bits (132), Expect = 7e-22 Identities = 137/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| ||||| || | || || || |||||| Sbjct 19467 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 19526 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||||||||| || ||| || ||||| || |||||||| || | || ||| Sbjct 19527 ATGAGACGCTGTTG---GTCCGGGGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACG 19583 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || ||| ||| || || ||||| ||||||||||| ||||| || |||||| Sbjct 19584 GCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTG 19643 Query 288460 ACG 288462 ||| Sbjct 19644 ACG 19646 >seq923 Length=148606 Score = 116 bits (128), Expect = 9e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || ||||| | Sbjct 98085 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 98144 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || ||| Sbjct 98145 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 98204 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||||||||| | || ||| || || || ||| || || || Sbjct 98205 ATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACC 98264 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 98265 TCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98311 >seq1500 Length=98849 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 326140 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCA 326198 |||||| |||||||| | ||||| | || |||| || | |||||| ||||| | Sbjct 89177 TTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCCGCATTCTTCATGATGGCGTCGT 89235 Query 326199 CGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 326258 ||| || ||||||||||| | || |||||||| | ||||||||||| | | || | Sbjct 89236 GGGAAGCTTCGCGGACGTTGAGCAGCTTTCCACGTAACGGGAACACTCCCCAGTTGTCAC 89295 Query 326259 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 326317 | ||||| ||||| ||||| ||| || || | | | || || || |||||||| ||| Sbjct 89296 GTCCGACGACGGAAAGCCCACCGACAGC-AGAGGCTTTGGCAGAGTCTCCCTCCGTAAGA 89354 Query 326318 ATGAGAGTGCA 326328 ||||| ||||| Sbjct 89355 ATGAGCGTGCA 89365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179629219539548