Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1112 105 1e-17 seq1500 91.5 3e-13 seq47 84.2 5e-11 >seq1112 Length=124996 Score = 105 bits (116), Expect = 1e-17 Identities = 178/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 334101 ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGATCGTGTTCCACGTAAGCA 334160 ||| |||| | ||| | ||| | | ||||| || ||||||||||| || ||||| | Sbjct 23724 ATGTAGTCCAAGATGGACATCTCACCCTCGGAACCATCGAGATCGTGCTCGACGTA--CC 23667 Query 334161 GTTTTCAAA--ACATCCGCAGAGGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCA 334218 | | | || | || | || ||||| || || | |||||||||| ||| ||||||| Sbjct 23666 ATGTGCGAACCTCGTCGGGCGAAGGGAAACCCTCGACCTGACCGTTCTGAATGGCGCGCA 23607 Query 334219 TCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCA 334278 | || || || || || | ||||| | ||||| |||||||| |||| |||||||| | Sbjct 23606 TGAGGGTAGACTTGCCGGAACCGTTGCGGCCACAGAGACCGTAACGGTGACCACGCTTGA 23547 Query 334279 GATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAAT 334338 | || | |||| |||||||| || |||| || || ||||| || | ||| | Sbjct 23546 GGCGGAGAGTGGCGGTGTTGAGAAGAATCTTGGCACCGTAGGCGAGAGAGAACTGACAGT 23487 Query 334339 CACACAGATCCTCACC 334354 |||| |||||||| Sbjct 23486 TGCACAAGTCCTCACC 23471 >seq1500 Length=98849 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 298261 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCA 298319 |||||| |||||||| | ||||| | || |||| || | |||||| ||||| | Sbjct 89177 TTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCCGCATTCTTCATGATGGCGTCGT 89235 Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379 ||| || |||||||| || | || |||||||| | ||||||||||| | | || | Sbjct 89236 GGGAAGCTTCGCGGACGTTGAGCAGCTTTCCACGTAACGGGAACACTCCCCAGTTGTCAC 89295 Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 298438 | ||||| ||||| ||||| ||| || || | | | || || || |||||||| ||| Sbjct 89296 GTCCGACGACGGAAAGCCCACCGACAGC-AGAGGCTTTGGCAGAGTCTCCCTCCGTAAGA 89354 Query 298439 ATGAGAGTGCA 298449 ||||| ||||| Sbjct 89355 ATGAGCGTGCA 89365 >seq47 Length=87938 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 || ||||||||| | ||| ||| | |||||||||||||| || || ||||| | | Sbjct 15409 ATCGGCATGAACGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTG 15350 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | || || || | ||||| |||||| ||| || ||||| | ||| |||||| | Sbjct 15349 GTAGCCCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAAC 15290 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 || ||||| ||||| || || |||||||| Sbjct 15289 ATCTCGCTGCAAGGCAAGACAAACTTCTT 15261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102856458337100