Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1377 120 3e-22 seq136 120 3e-22 seq923 114 1e-20 >seq1377 Length=3727 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | ||| |||||||||||| ||||| || | || || || |||| || Sbjct 2363 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 2422 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| || | ||| |||||||| | || | || |||||||||| || Sbjct 2423 AGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TG 2481 Query 42120 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || || |||| | | | ||||| |||||||| |||| |||||||| || Sbjct 2482 AATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 2541 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| || || || ||||| Sbjct 2542 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 >seq136 Length=82364 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||||| ||||| || |||| || |||||||| || ||||| Sbjct 4075 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 4016 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| || | || || | ||| Sbjct 4015 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC-TGGATCTTCGTCTTCACGT 3957 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| |||||||| |||| |||||||| ||||| || || ||||| | Sbjct 3956 TGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA 3897 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 3896 CGAAAATCTGCAT 3884 >seq923 Length=148606 Score = 114 bits (126), Expect = 1e-20 Identities = 143/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 98120 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 98179 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA--GC 42134 ||||||||||||||||| | || | | ||||||||| |||||| |||| || Sbjct 98180 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 98239 Query 42135 GTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 |||| | | |||| || ||||| |||| ||||| || || ||||| || ||||| Sbjct 98240 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 98297 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 98298 ACGAAGATCTGCAT 98311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543201487593440