Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1256 248 9e-61 >seq1256 Length=115194 Score = 248 bits (274), Expect = 9e-61 Identities = 998/1550 (64%), Gaps = 39/1550 (3%) Strand=Plus/Minus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| || |||| ||||| |||||||| || || || || || ||||| ||||| | Sbjct 75400 CCATG-CCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCT 75342 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 ||||| | || | |||| |||||| ||| ||| || | ||||| |||||| ||| | Sbjct 75341 TCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCG 75282 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | | ||| || || || || ||||| ||| ||||| | | |||| | | Sbjct 75281 CCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCG 75222 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | || ||||| ||| || || || ||| ||||| |||| |||||||| || |||| Sbjct 75221 GCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCT 75162 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 |||||||| | || |||||||| || |||||||| | | | ||| | ||||| Sbjct 75161 TCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCA 75102 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| | |||||||||||| | ||||| | ||| ||||||| | |||||||||| Sbjct 75101 TCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACG 75042 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | ||| | || ||||||||||| || ||| | || ||| | || | Sbjct 75041 GCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCA 74982 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || ||||| | ||| | ||| || | || ||| ||| || ||||| | Sbjct 74981 TGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTC 74922 Query 94367 TGTCCGACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG 94424 | | || || | || || || || || || | || | ||||| |||| Sbjct 74921 TCGCTGATGTCTACGG--CGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGG 74864 Query 94425 CAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTAC 94480 || | | | || | | ||| ||||| ||| | | | || | || | | Sbjct 74863 TCGTGCTCGCCGAACCGTCA---AGGCTCAAAAGCTTTGGTACGCCGTTC-TCGAGGCTC 74808 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || |||||| || | || | ||| | | ||||||| ||| ||| |||||| |||| Sbjct 74807 AGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCGAACC 74748 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 | || ||||||| |||||| |||| || |||||||| ||||| | ||||| | Sbjct 74747 AAAAGAACCTCGGCACCATCAAGTGCTCTAACCTGTGCACGGAGATCATGGAGTACAGCG 74688 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 ||||||| ||| | ||||| || ||||| | | || ||| | ||| ||| | | Sbjct 74687 CTCCGGATGAGGTCGCTGTCTGCAACCTTGCCAGTATGGCTCTGCCTTCTTACGT-CCAC 74629 Query 94661 AT-GCCT---ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGA 94716 || | || ||||| || | | ||| | || |||| | || || Sbjct 74628 ATCGACTCGCACACGAACACAAGGACATACGACTTCAAGAAGCT------CCACGAGGTT 74575 Query 94717 AGGATGGTC--TTG----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCG 94770 | | |||| ||| ||||| |||| | | ||||| |||| |||||| || || Sbjct 74574 ACCAAGGTCGTTTGTGGCAACCTCAACAAGATCATCGATGTCAACTACTACCCTGTTCCC 74515 Query 94771 GAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCG 94830 |||||| |||| || ||| || || || |||||||| ||||| ||| | ||| |||| Sbjct 74514 GAGGCGAAGAAGTCCAACATGCGCCACCGCCCCATCGGTATCGGAGTCAACGGTCTCGCC 74455 Query 94831 GACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTG 94890 ||||| | |||| ||| || ||| |||| ||| || | | || | Sbjct 74454 GACGCTTTCATGATCATGGGTTACGCCTTCGACAGCCCCGAGGCCAAGAAGCTCAACATC 74395 Query 94891 AACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG 94950 | || ||||| | || || ||| || | | | ||| | | | |||| | Sbjct 74394 CAGATCTTCGAGACGATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTCGCCA---AG 74338 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTT 95009 || |||| | |||| | | || || |||| | | ||||| | || | Sbjct 74337 GAGCTCGGGACCTACGAGAC-ATACGAGGGCAGCCCAACCAGCAAGGGCGAGCTGCAATA 74279 Query 95010 CGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATG 95068 ||| |||||||| || | ||| || || | ||||||| | | | |||| | Sbjct 74278 CGATCTCTGGGGAGTCACTCCCAGTGGACTCTGGGACTGGGCCGAAATCAAGCGC-AACA 74220 Query 95069 TTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGG 95128 || | ||||||| | |||| | || || | ||||| |||||||| || || || Sbjct 74219 TTGCCGCACACGGTCTCCGAAACTCTCTCCTGCTCGCCCCTATGCCCACTGCTTCGACAA 74160 Query 95129 CGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC 95188 |||||||| ||| |||||||| || || || | ||| |||| | |||| | | | Sbjct 74159 GTCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGAC 74100 Query 95189 GGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA-CCTGACGTCT 95247 | ||||||||||| || |||| ||| ||||| || || || || | || || Sbjct 74099 GTGTGCTCGCCGGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGAGCTTGTCG-AG 74041 Query 95248 CTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAG 95307 | ||| ||||| || || | ||||||| | || | | |||||| ||||| Sbjct 74040 CAAGGTCTGTGGAACGAACAGATGAAGAACCGCATCATAGCCCACGGCGGCTCGATCCAG 73981 Query 95308 AACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCG 95367 ||| | || || || || ||||||||| || |||||||| |||||||||||| || Sbjct 73980 AACGTGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTCG 73921 Query 95368 CAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCA 95417 ||| || || ||||| || |||| ||| || |||| |||||||| Sbjct 73920 CAGAAGGTCATCATCGACATGGCTGCCGACCGAGGTGCCTTTATCTGCCA 73871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712897389360