Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1256 174 2e-38 seq47 122 1e-22 >seq1256 Length=115194 Score = 174 bits (192), Expect = 2e-38 Identities = 498/757 (66%), Gaps = 19/757 (3%) Strand=Plus/Plus Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 74657 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 74716 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || | ||| |||||||| | ||||||||| || ||||| |||| || |||||| Sbjct 74717 TTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTG 74776 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || ||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 74777 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 74836 Query 116619 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | || || |||| || || ||||| ||||||||| |||||| ||| Sbjct 74837 TGAGCCTTG-ACGGTTCGGCGA--GCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 74893 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736 || ||||| || || | || | ||| || || || | | || || | || ||| Sbjct 74894 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 74953 Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796 || | || || || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 74954 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 75013 Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 || || || || | || || | || || || | | || | || || | | Sbjct 75014 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 75073 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCA 116910 | || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 75074 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCA 75130 Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970 |||| | || || | || || ||| || ||||||||||| || | |||||| | | Sbjct 75131 CCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 75190 Query 116971 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || || || || || || || ||| | | | | | || |||||||| | Sbjct 75191 GAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTGA 75248 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 || || || || ||| ||| ||| ||||| | ||||| || ||||||| | Sbjct 75249 GGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGC 75308 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 | ||||||||||| |||| | | || |||||||| |||||||| || | |||| Sbjct 75309 CGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTG 75368 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||||||||||||||||| || | || ||| |||| Sbjct 75369 TACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 75405 >seq47 Length=87938 Score = 122 bits (134), Expect = 1e-22 Identities = 175/244 (72%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 15527 AGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 15586 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 15587 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGAT 15646 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697 ||||| || || || |||| || ||||||||||||| | | | | | || | | Sbjct 15647 ACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCCTCGTCGTTGA 15705 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || ||||||| ||||||| || || || | ||||| ||||| || | Sbjct 15706 TCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGA 15765 Query 127758 AGAG 127761 |||| Sbjct 15766 AGAG 15769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613494423712560