Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1256 163 5e-35 >seq1256 Length=115194 Score = 163 bits (180), Expect = 5e-35 Identities = 333/490 (68%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 |||||||||||| |||||||| | ||||| | | ||| || ||||| | || ||||| Sbjct 73726 CACCGTGAACTGGATGGCGTTGGCAGCAGGTCGGGTTCGGAGGTAGTATGTTCCCGTCTT 73785 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 | ||||||| ||| ||||| | ||||||| | || | || | | |||| | Sbjct 73786 CAATCCCTTCTTCCAGCCGTAGAAGTGCATGCTCGTAAGCTGGCCAAAGCTGGGTGCTTG 73845 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 | ||| ||||||||| || |||| ||| |||||| || || || || ||||| | Sbjct 73846 GAGGTGGATGTTCAGACTTTGAGATTGGCAGAT-AAAGGCACCTCGGTCGGCAGCCATGT 73904 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAG 204083 ||| ||| ||||||||| ||||||||||| |||||| ||| | || || | | | Sbjct 73905 CGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGCCTTGATGCGGTCGG 73964 Query 204084 GCACATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 | | | || ||||| || |||||||||| || ||| || | | || || || Sbjct 73965 GAA----TGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCGGTTCTTCATC 74020 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | || ||||| || | || ||||| |||| ||| ||||||| || || Sbjct 74021 TGTTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAGCCAAGGGTTGACGACTTGG 74080 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || |||| ||||| | ||||||| | |||||| | ||| | || || || |||| Sbjct 74081 AACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAGGCTCAAAGCACTCG 74140 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||| ||||| |||||| || || |||||||| || || || || || ||||| Sbjct 74141 TTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGAGCAGGAGAGAGTTT 74200 Query 204320 CGCACACCGT 204329 || | ||||| Sbjct 74201 CGGAGACCGT 74210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138640892960