Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq136 138 1e-27 seq1377 134 2e-26 seq1001 132 5e-26 seq923 129 7e-25 seq447 116 4e-21 >seq136 Length=82364 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| |||| || ||||||||||||||||| Sbjct 4075 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 4016 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||||| |||| | ||| Sbjct 4015 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGTCTTCA-CGT 3957 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| |||||||| || | |||||||| ||||| || || || || | Sbjct 3956 TGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA 3897 Query 46581 CAAAGATTTGCAT 46593 | || || ||||| Sbjct 3896 CGAAAATCTGCAT 3884 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| || || || |||| ||||| ||||| |||||||| Sbjct 3847 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAA 3788 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||| ||||| | || | || |||||||||| ||||||| |||||| ||| Sbjct 3787 AATAAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGTCTTGA-CGT 3729 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| ||||| || || | |||||||| ||||| || || || || | Sbjct 3728 TGTCGATGGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA 3669 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 3668 CGAAGATCTGCAT 3656 Score = 127 bits (140), Expect = 2e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 || ||| ||| || | | ||| | |||| ||| | ||| |||||||||||| |||| Sbjct 4346 ATCATTGGCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGT 4287 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || ||||| || |||| |||||||||||||||||||| ||||| || || |||| Sbjct 4286 AGTCAGAGAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGT 4227 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || |||||||||| ||||| |||| | | | | ||||| | Sbjct 4226 CCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAG 4167 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | ||||| || ||||| || || || || || ||||| ||||| Sbjct 4166 ACTCGACTTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||| |||||||||||| ||||| ||||| || ||||| |||| ||| Sbjct 3636 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 3577 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| || | |||||| ||||| | || | | |||||||||| | Sbjct 3576 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGG 3517 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | |||||||| ||| Sbjct 3516 ATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTG 3457 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || ||||| Sbjct 3456 CCAGTCAGAGTCTTAAC 3440 >seq1377 Length=3727 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 2380 CTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 2439 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || |||||||| | || | || |||||||||| |||||| |||||| | Sbjct 2440 GATCAATCGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATT 2499 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| |||||||| || | |||||||| ||||| || || || || || Sbjct 2500 GTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGAC 2559 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 2560 GAAAATCTGCAT 2571 Score = 134 bits (148), Expect = 2e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||||| |||||| ||||| ||||||||||| || || || |||| ||| Sbjct 2819 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 2878 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| || | |||||| ||||| | || | || ||||||||| | Sbjct 2879 AGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 2938 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | |||||| ||||| || || | ||||| || ||| Sbjct 2939 ATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATTGTCTTG 2998 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||| ||||| Sbjct 2999 CCGGTGAGGGTCTTGACGAAGATCTGCAT 3027 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||||||||| Sbjct 2608 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 2667 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || || ||||| | || | || |||||||||| |||||| |||| | | Sbjct 2668 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATT 2727 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| ||||| || | |||||||| ||||| || || || || Sbjct 2728 GTCGATCGTGTCGGAGCTC---TCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 2784 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 2785 GACGAAGATCTGCAT 2799 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||| |||||| ||||| ||||| ||||| || ||||| |||| ||| Sbjct 3047 ACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 3106 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| || | ||||| ||||| | || | || |||||||||| Sbjct 3107 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 3166 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | |||||||| ||| Sbjct 3167 ATCTTTGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 3226 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || || || Sbjct 3227 CCAGTCAGAGTCTTGAC 3243 >seq1001 Length=137376 Score = 132 bits (146), Expect = 5e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| |||||||||||||| || || |||| |||||||||||||||||||| Sbjct 40972 TCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 40913 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | || ||||||||| |||||| |||||| ||| Sbjct 40912 ATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTT 40854 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||| || || || || | |||||||| ||||| || || || || || Sbjct 40853 GTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 40794 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 40793 GAAGATCTGCAT 40782 >seq923 Length=148606 Score = 129 bits (142), Expect = 7e-25 Identities = 146/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||||||||| Sbjct 98120 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 98179 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||||||||| | || | | ||||||||| ||| || |||||| || Sbjct 98180 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 98239 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| || ||||| || | ||||| || || |||||||| || || Sbjct 98240 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 98297 Query 46580 ACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 98298 ACGAAGATCTGCAT 98311 >seq447 Length=69015 Score = 116 bits (128), Expect = 4e-21 Identities = 136/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 19466 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 19525 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||| ||||| | || | | ||||||||| |||||| |||||| || Sbjct 19526 GATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACGGC 19585 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| ||| || || || | ||||| || ||||| || || || || Sbjct 19586 GTCG--ATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTG 19643 Query 46580 AC 46581 || Sbjct 19644 AC 19645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565226628910320