Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq47 188 7e-43 seq1001 132 5e-26 seq447 132 5e-26 seq136 123 2e-23 seq1377 114 1e-20 seq923 113 5e-20 >seq47 Length=87938 Score = 188 bits (208), Expect = 7e-43 Identities = 409/598 (68%), Gaps = 17/598 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaa-TTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGG 132685 |||| || || || || || || | || || ||| | ||| || || ||||| || | Sbjct 15256 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 15315 Query 132686 CTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742 | |||||||||||| | | |||| || | || ||||| | ||| || || || | Sbjct 15316 TGGCGTTGTAGTGCTTCTCGTTCCCGA---GGGCTACCAGCAGTCGGTCAGCGACAAATT 15372 Query 132743 CGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTC 132800 ||||||| || ||| || || | | | || | || | | || || | | || || Sbjct 15373 CGATGTACTGGCTCATAAGTCGTGCGTTCATG-CCGATCA-ATGAACAGGGAAGAGCATC 15430 Query 132801 GGTGAG-AAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 ||| || ||||| | |||| |||| ||| | |||| | ||| | |||| | | Sbjct 15431 GGTCAGGAAAGCCT-GCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGG 15489 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | |||||| | | | || |||| | |||||||||||||||| |||| |||| Sbjct 15490 GGTGCGGCCGCTTCTTGAGGTGGCTGAAGAGCAAGCAAGCAAAGTCGGTGTGCAGACCCT 15549 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | | ||||| |||||| ||| || | ||||||||||| || || || |||| Sbjct 15550 CGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGA 15609 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| ||||||| ||| || ||||||| ||||| ||||| || || || | Sbjct 15610 GCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAAGGCAA 15669 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 ||||||||||| | || |||| || | | | |||||||||||| ||||| ||||||| Sbjct 15670 CCAGGCGCTCGGCAAAGGTGGAGTCCTCGTCGTTGATCCAGCGCAGGGCCCACTCGGCCT 15729 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT-TCCGAG 133158 ||| |||||| || || || || || |||| || | | | | | || | || | Sbjct 15730 TTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGAAGAG--GTACTCGCGCTGTGCGGG 15787 Query 133159 GAA-CGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATG 133215 | || | ||| |||||||||||| || || | || ||||| | ||||||| || Sbjct 15788 GTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTCCCTG 15845 Score = 187 bits (206), Expect = 2e-42 Identities = 179/226 (79%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCT 133276 |||||| |||||||| ||||| || ||||| | |||| || ||| |||| ||| |||| Sbjct 15924 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCT-GAGCTGAACCGCT 15982 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336 |||| || || |||||||||||||| || |||||||| || || || ||||| ||| Sbjct 15983 CGACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCGAAGAATGCGAGGACGTGGCTGA 16042 Query 133337 TGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 |||| || ||||||||||||||||| | ||||||||| || |||||||||| |||| Sbjct 16043 TGAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGT 16102 Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||||| | ||||| ||||| ||||| || || |||||||| Sbjct 16103 CGATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACAT 16148 >seq1001 Length=137376 Score = 132 bits (146), Expect = 5e-26 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||||||| |||| || ||| || || Sbjct 40782 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 40841 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || |||| ||||| ||||| || ||| | |||| Sbjct 40842 GACACGATTGACAACG--TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACC 40899 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||| ||||| ||||| || |||| || || || |||||||| Sbjct 40900 AACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACA 40959 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||| | || || || | || || ||| | | ||||| Sbjct 40960 ACATCCAAAAAGAATCCACCCTCCACCTCGTCCTCCGTCTCCGTGGCGG 41008 >seq447 Length=69015 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || ||||| ||||| || |||||| |||| |||||| | ||||| | | | Sbjct 19646 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 19587 Query 38315 AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | |||| || |||| ||||| || || |||||| | ||||||||||| |||| Sbjct 19586 CGC-CGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCA 19528 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | ||| ||||| ||||| || |||| ||||||||| ||||||||||||||| |||| Sbjct 19527 TCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGG 19468 Query 38434 AAGCGACGCTGCATTTGGTGCTGCG 38458 | | || || || ||||| || || Sbjct 19467 AGTCCACTCTTCACTTGGTCCTCCG 19443 >seq136 Length=82364 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | | Sbjct 3656 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 3715 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| ||||| | |||| Sbjct 3716 GACACCATCGACAACG--TCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 3773 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| ||| || || || || || |||| || |||||| |||||||| Sbjct 3774 AACAGCGCCTTATTTTCGCCGGAAAGCAACTCGAAGACGGCCGAACCCTCTCCGACTACA 3833 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| || ||||| | || || || ||||| || ||| || | || || Sbjct 3834 ACATTCAGAAGGAGTCCACTCTTCACTTGGTTCTTCGTCTGCGCGGTGG 3882 Score = 122 bits (134), Expect = 9e-23 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| |||| || ||| | | |||| | | | Sbjct 3439 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCAGACACCATTGA 3498 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| || |||| ||||| ||||| || || | ||||||||||| ||| Sbjct 3499 CAATG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGCCTC 3556 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| || || || |||| |||||||| ||| ||||||||||||||| Sbjct 3557 ATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAG 3616 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || | || ||||| ||||| || ||| || | || || Sbjct 3617 GAGTCCACACTGCACTTGGTCCTCCGTCTGCGTGGTGG 3654 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | | Sbjct 3884 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 3943 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || |||| ||||| ||||| ||||| | |||| Sbjct 3944 GACACTATCGACAACG--TGAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 4001 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||| || || |||| Sbjct 4002 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACA 4061 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| | ||||| || ||||| || ||| || | || || Sbjct 4062 ACATCCAGAAGGAGTCAACGCTTCACTTGGTTCTTCGTCTGCGCGGTGG 4110 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| | || |||||| | | Sbjct 4112 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCA 4171 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || || | ||||| ||||| ||||| | |||| Sbjct 4172 GACACCATCGACAATG--TGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACC 4229 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | || | ||| ||||| ||||| || |||| || || ||| ||||||| Sbjct 4230 AACAACGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACA 4289 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||||||||| | || || |||||||| || ||| | | || |||| Sbjct 4290 ACATCCAAAAGGAGTCCACACTTCATTTGGTCCTCCGTCTCCGCGGTGGCC 4340 >seq1377 Length=3727 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || || ||| | || Sbjct 2799 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 2740 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | |||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 2739 GACA-CGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 2681 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| ||||| ||| |||| || | |||||||| ||| ||||| Sbjct 2680 ACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 2621 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || || ||||| || ||| Sbjct 2620 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGT 2584 Score = 114 bits (126), Expect = 1e-20 Identities = 159/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| |||| || ||| || | |||| | | Sbjct 3244 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 3185 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| ||| || | ||||| ||||| || || | ||||||||||| ||| Sbjct 3184 CAATG--TCAAGACAAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTC 3127 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| || || || |||| |||||||| ||| ||||||||||| ||| Sbjct 3126 ATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAG 3067 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || | || ||||| ||||| || || || | || ||| Sbjct 3066 GAGTCCACACTGCACTTGGTCCTCCGCCTGCGTGGTGGC 3028 Score = 113 bits (124), Expect = 5e-20 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | | Sbjct 2571 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 2512 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || || | ||||| ||||| || ||| | |||| Sbjct 2511 GACACCATTGACAATG--TCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACC 2454 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || | || | ||||||||| ||||| || |||| |||||||| ||||||| Sbjct 2453 AGCAACGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACA 2394 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| |||||||| | || || |||||||| || ||| Sbjct 2393 ACATTCAAAAGGAGTCCACTCTTCATTTGGTCCTCCGT 2356 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| |||| || || | | Sbjct 3027 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAATCATCA 2968 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | |||| || |||| ||||| ||||| || || | ||||| Sbjct 2967 GACA-CGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 2909 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||||| || |||| || |||||| ||||||||| Sbjct 2908 ACAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 2849 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || |||| ||||| || || Sbjct 2848 CATCCAGAAGGAGTCCACATTGCACTTGGTTCTCCG 2813 >seq923 Length=148606 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || |||||| |||| || ||| | || Sbjct 98311 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 98252 Query 38304 GACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | | | |||| ||||||| ||||| || || || ||| | ||||| Sbjct 98251 GACTCCATCGACGC-CGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCA 98193 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| || || || |||||||| Sbjct 98192 GCAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 98133 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || | ||||| || Sbjct 98132 CATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCG 98097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500162383901440