Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq945 325 5e-84 seq749 205 1e-47 seq817 116 5e-21 >seq945 Length=142668 Score = 325 bits (360), Expect = 5e-84 Identities = 985/1513 (65%), Gaps = 10/1513 (1%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 |||||||| || ||||| | | ||||| || || || || || ||||| | || || Sbjct 99047 TCAATGTCGTCCTTCGACAGCCGTCCCTTGTCGTTGGTGATGGTGATCTTCTGCGACTTG 98988 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | || ||| ||| | || || || | ||| || || || |||||||| | Sbjct 98987 CCGGTGGTCTTGTCTGCGGCGGAAACGTTGAGAATGGAGTTGGCGTCGACATCGAAGGTG 98928 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||||| || ||| | ||||||| || || || | | || || | || Sbjct 98927 ACCTCGATTTGGGGAACACCACGGGGTGCGGGGGGGATGCCGGAGAGCTCGAACTTGCCG 98868 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || || |||| ||| | | | | ||| ||||| || ||||| | || ||| | Sbjct 98867 AGCAAGTTGTTGTCCTTTGTCCGCGCACGCTCACCCTCGTAGACCTGGATCAGCACACCG 98808 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || || || || |||||||| | ||||| | || | || || || Sbjct 98807 GGCTGGTTGTCGGCGTATGTGGAGAAGATCTCGGACTTCTTGGTGGGGACAGTGGTGTTA 98748 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | | || | || || | | ||| || ||| |||| || | || ||||| | Sbjct 98747 CGCTTGATGAGGGGAGTGAAGACACCGCCGGCAGTCTCGATACCCATGGAGAGAGGAGCG 98688 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || || | ||| | ||||||||| ||| ||||| | | |||||||| Sbjct 98687 ACATCGAGGAGGAGCAGGTCTTGGGTCTTCTCGGAGGTGTCACCGGAGAGAATGGCGGCC 98628 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 ||||| | || ||||| ||||| ||||| |||||||| || | || || | || | Sbjct 98627 TGGACAGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTGGGCTCGCGA 98568 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 ||||| || | || | | | || | || || || || || |||||||| Sbjct 98567 CCGTTGAAGAAGTCGCGGAGGAGCTTCTGGACACGGGGAATACGCGTGGAACCACCGACA 98508 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACA 7210 | ||||| || || || | || || ||||| ||||| || || || ||||| Sbjct 98507 AGGACGATCTCGTTGACGGAGGCCTTGTCTATCTTCGAGTCGCGGAGGACCTTCTCGACG 98448 Query 7211 GGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATG 7270 || || || | ||| | ||| |||||| ||||| ||||| ||||| || ||| Sbjct 98447 GGCTCGATGGTGTGGGAGAAGAGGTCACCACACAGCTCCTCGAAACGGGCACGAGTGATG 98388 Query 7271 GATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTC 7330 || || ||||| || | || || | | || || || || ||||| || || || | Sbjct 98387 GAGGTGTAGAAGTCGATACCCTCAAAGAGGGAGTCGATCTCGATGGTGGTCTGGGCGGCG 98328 Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 ||||| | || |||||||| ||||| || || || | |||||||| |||||| | Sbjct 98327 GAAGAAAGAGTGCGCTTTGCTCGCTCGGCGGCGGTGCGGAGACGACGAACGGCACGGGCA 98268 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGT 7450 || || | ||||| | || || || ||||| | ||||| | ||| Sbjct 98267 GAGGAGGTGATGGCCTTCTTGTTCTTGCGCTTGAACTCCTGGACAAAGTGGGTTACGAGA 98208 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 | ||| | || || ||||||||||| || || || ||||| || ||||| || || Sbjct 98207 CGGTTGTCGGAGTCCTCGCCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACCTCGAAT 98148 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || | || ||| | | | ||| ||||| ||||| || | |||| ||| || ||| Sbjct 98147 ATGCCCTCCTCGATGGTGAGGAGCGAGACATCGAACGTGCCTCTTCCCAAGTCGAAGATG 98088 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 || |||||| | ||| | || ||||| ||||||||||| || || || || || || Sbjct 98087 AGAACGTTCTTCTCGCCCTCGCCCTTCTTGTCGAGACCGTAAGCAATGGCAGCGGCAGTG 98028 Query 7631 GGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 || || || || || || | ||| ||| || || ||||| || | || || || || || Sbjct 98027 GGCTCGTTGATGATTCGCATGAC-GTTGAGACCGGCAATGGTACCGGCGTCCTTGGTAGC 97969 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||||||| || ||||| |||||||| || || || ||||| |||||| |||| Sbjct 97968 CTGTCGTTGAGAGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTCCTTGACGGAGCC 97909 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||||| || | || || | || ||| ||| |||||||| | || | ||| || Sbjct 97908 ACCGAGGTAGGCCTCGGCAGTCTCGCGCATCTTGAGCAGAACCATGGCGGAGACCTCCTC 97849 Query 7810 AGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG 7868 || | || ||| || || || || || | || || | || || || || | | Sbjct 97848 AGGGGTGAA-TGTCTTGGTCTCGCCCTTGTACTCGACCTGGATTATTGGCTT---GGTAC 97793 Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAA 7928 | | ||| ||||| | | ||| | ||||| ||| || |||| ||| | | Sbjct 97792 CTTGGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGACTGTACCTCGGAGTCAGCGA 97733 Query 7929 ACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988 |||| | ||||| || ||||| || || || |||||||| | |||||||||||| || | Sbjct 97732 ACTTGCGGCCGATGAGTCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGGTCT 97673 Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048 ||||||| | ||||| ||||| || || || | | || ||||| || ||||| || | Sbjct 97672 GGTTCTTGGTGGCGTCACCGATGAGGCGCTC-TGA--GTCGGTAAAGGCCACGTATGAGG 97616 Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108 |||| || || || | |||||||| || || | || |||||| | |||||||| ||| Sbjct 97615 GGGTTGTGCGGTTACTCTGGTCGTTGGCGATGACCTCAACGCGGCCATTTTGCCATACGG 97556 Query 8109 CGACGCACGAATA 8121 | || || || || Sbjct 97555 CAACACAGGAGTA 97543 >seq749 Length=57449 Score = 205 bits (226), Expect = 1e-47 Identities = 452/667 (68%), Gaps = 12/667 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || |||||||||| | || || || || || ||||| || || || ||| Sbjct 5084 TCGAAGTCCTCGGCACCCAAGTGGATGTCACCGGCAGTGGCCTTGACCTCGAATATGCCT 5143 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | || ||| ||||| ||| | || || |||| |||||| |||| ||| Sbjct 5144 TCCTCGATGGTGAGCAGCGAGACATCGAACTTGCCTCCTCCCACGTCAAAGATGACAACG 5203 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | || ||||| ||||||| ||| || || | || || || || || Sbjct 5204 TTCTTCTCGCCCTCGCCCTTCTTGTCGAGACTGTAAGCAATGGTAGCAGCGGTGGGCTCG 5263 Query 7637 TTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | ||| ||| | || ||||| || || || || || || || | ||| Sbjct 5264 TTGATGATGCGCATGAC-GTTATGACCGGCAATGGTAGCAGCGTCCTTGGTGGCCTATCG 5322 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| || ||| | |||||||| || || || ||||| ||| || |||| |||||| Sbjct 5323 TTGGGAGTCGCTGAAGTAGGCGGGAACAGTGACGACGGCGGCCTTGACGGAGCCACCGAG 5382 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || | || | | || ||| ||| || ||||| | || | ||| |||| | Sbjct 5383 GTAGGCCTCGGGAGTCTCGCGCATGTTGAGCAGGACCATGGCGGAGACCTCCTCAGGGGT 5442 Query 7816 AAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 || ||| || || || | || | || || | || || || | | | | Sbjct 5443 GAA-TGTCTTGGTCTCGACCTTGTACTCGACCCAGAGTATTGGCTTG---GTACCTTGGT 5498 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 || ||||| | | ||| | ||||| ||| || |||| ||| | ||||| | Sbjct 5499 CGAGGACCTTG-AGGGCCAGTGCTTCATGTCGGACTGTACCTCGCTGTCAGCGAACTTGC 5557 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 |||||||| ||||| || || || |||||||| | |||||||||||| || ||||||| Sbjct 5558 GGCCGATAAGTCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGGTCTGGTTCT 5617 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 | || ||||| ||||| || || || | | || || || |||||||| || ||||| | Sbjct 5618 TGGCGGCGTCACCGATGAGGCGCTC-TGA--GTCGGTGAAGGCGACGTATGAAGGGGTAG 5674 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || | || |||||||| || || | || || ||||| |||||||| ||| | || | Sbjct 5675 TGCGGTCGCCCTGGTCGTTGGCGATGACCTCAACTCGGTC-TTTTGCCATACGGCAACAC 5733 Query 8115 ACGAATA 8121 | || || Sbjct 5734 AAGAGTA 5740 >seq817 Length=39702 Score = 116 bits (128), Expect = 5e-21 Identities = 291/433 (67%), Gaps = 18/433 (4%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||||| | | ||| || | |||| | | | || || Sbjct 22317 TCCTCGAAACGGGCACGGGTGATGGAGGCCTGGAAGTCGATACCGTTGGAGAGGGAGTCG 22376 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | || || || || | | || | ||||||||||||||||| ||||| | Sbjct 22377 ACCTCGACAGTGGTCTGGGTGACACTG--GACAGTGTTCGCTTTGCGCGCTCGCACGCAG 22434 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTT---ACCGGAAATATCTTTCTTATGTTTACGTT 7421 || | |||||| | |||||| |||| |||| || || ||| | || || | Sbjct 22435 ACCGCAGACGACGGATGGCACGGGGGTCGTCACCG---ATCTCGACCTTGTTCTTGCGCT 22491 Query 7422 TAAACTCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 ||||| | |||||| |||| | | | | | ||||| || |||||||| | || Sbjct 22492 CGAACTCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCGAGATG 22549 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| | || | ||| || ||||| | | || || Sbjct 22550 GGTGTCACCAGCGGTTGCCTTGACGGCGAAAACACCACCAGTGATGTTGAGAAGGGAGAC 22609 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTC 7597 ||| ||||| || || || ||||| |||||||| |||||| | ||| ||| || || Sbjct 22610 ATCGAACGTGCCTCCTCCGAGGTCGAAAATGAGGACGTTCTTCTCG--GTCGATGACTTG 22667 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657 ||||||||||| || || || || || || || || || || ||||| ||| || Sbjct 22668 GAGTCGAGACCGTAAGCAATGGCGGCAGCGGTGGGCTCGTTGATGATACGTAGAACGTCG 22727 Query 7658 AGGCCAGCAATAG 7670 || || || |||| Sbjct 22728 AGACCGGCGATAG 22740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635119573359440