Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1256 187 3e-42 seq47 127 3e-24 >seq1256 Length=115194 Score = 187 bits (206), Expect = 3e-42 Identities = 475/716 (66%), Gaps = 15/716 (2%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || ||||||||||||||||||||||| | || |||||||| Sbjct 75405 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCG 75346 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | ||||| || || ||| | ||||| |||| |||||||| Sbjct 75345 TGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTCAAGACC 75286 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| ||| ||||||||| ||||| | ||||||| || | | Sbjct 75285 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 75226 Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | | ||| || || || || || ||| || | ||||| | || ||||||| Sbjct 75225 ACC--GGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTC 75168 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996 |||| || ||| ||| || ||||| || | || | ||| ||||| || || Sbjct 75167 GCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTC-CA--GGTG 75111 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | |||| |||| ||||||| |||||| | || || | |||||||| || | | Sbjct 75110 CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGA 75051 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||||| || ||| || ||||||| ||| || ||||| || | Sbjct 75050 AGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTG 74991 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | | ||||||||| |||| || ||| || | ||||| || | || || | || Sbjct 74990 ACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGT 74931 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 ||||||||| | |||| | || || ||||| || || |||||| ||||||||| Sbjct 74930 GCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGC 74871 Query 112237 AAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 112295 || |||| || | || || || ||| | | ||| | || ||||| || Sbjct 74870 GTGAGGGTCGTGC-TCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAG 74812 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 |||| || |||||||| | || | ||||||||||| ||||| ||||| ||| Sbjct 74811 GCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCG 74752 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 || |||||||| | || |||||| | || ||||| || || || ||| |||| Sbjct 74751 AACCAAAAGAACCTCGGCACCATCAAGTGCTCTAACCTGTGCACGGAGATCATGGA 74696 >seq47 Length=87938 Score = 127 bits (140), Expect = 3e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 15687 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 15628 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 15627 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 15568 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||| || |||||||| || ||| || ||||| Sbjct 15567 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 15528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620729473039520