Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1256 158 1e-33 >seq1256 Length=115194 Score = 158 bits (174), Expect = 1e-33 Identities = 559/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| ||| ||||| ||||| |||| ||| || || |||| |||| Sbjct 74642 GGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATG 74701 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| |||| ||| || | ||| ||| || | |||||| || ||||| ||| | Sbjct 74702 ATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGG 74761 Query 110401 TT-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459 || ||| || ||||| || |||||| | ||| | ||||| |||||||| | || ||||| Sbjct 74762 TTAGCA-GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAAC 74820 Query 110460 GGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | ||| | | || ||| ||| | ||| |||| || ||||||||| Sbjct 74821 GGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTT 74880 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 ||| | |||| || || | ||||| ||||||| ||||| || |||| Sbjct 74881 CTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGG 74940 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 || | || ||||| | ||| || || || | ||||||||||| |||||| ||||| Sbjct 74941 GCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCA 75000 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || |||| || |||||| || |||| || | || ||||| | || || Sbjct 75001 AAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTC 75060 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 | || || | || || |||||||| || || | |||| |||| || || ||| Sbjct 75061 GAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACG 75120 Query 110760 ---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 || |||| | || ||||| || ||| |||||||| | |||||||| | Sbjct 75121 CTTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCAC 75180 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876 || || | || ||| || || || ||| || | |||| ||| ||| Sbjct 75181 GATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTG 75240 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTAC 110935 ||| | | || || ||||| ||| ||| || || || || ||| |||| || Sbjct 75241 GATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT-TGAGAGTGT 75299 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 | || || || || ||||| || |||| ||| | || ||||| || ||||| |||| Sbjct 75300 CGTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAG 75359 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGAC 111054 | || || || || |||||||| || || | ||||| |||| || | | ||| Sbjct 75360 GGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGAC 75418 Query 111055 ATCTTGTTGTATGTGTCGAGTGC-----GGAGGGTACATCTTTACCGTGAATACCAATGG 111109 || |||||| ||||||| || || || || | ||||| || || | | Sbjct 75419 ATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAAC-----TCCCGTGGATGCCGACAG 75473 Query 111110 CAACTCGCATGAACATATATTGAGG 111134 |||||||||||| ||| | ||| || Sbjct 75474 CAACTCGCATGAGCATGTGTTGGGG 75498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963734574800