Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1256 325 7e-84 seq47 168 1e-36 >seq1256 Length=115194 Score = 325 bits (360), Expect = 7e-84 Identities = 1101/1702 (65%), Gaps = 57/1702 (3%) Strand=Plus/Plus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| || |||||||| ||||| | |||| |||| ||||||||| |||||| | | | | Sbjct 73891 GTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGC 73950 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTG---TATGGTCAG 212848 |||| | || || | |||||| | |||||| | || || | ||| |||| | | Sbjct 73951 CTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCG 74010 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAG 212907 | | ||| | |||||||| || || || || || || | | | ||| || Sbjct 74011 GTTCTT---CATCTGTTCGTTCCACAGACCT-TGCTCGACAAGCTCACGCAGCAGCCAAG 74066 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||||| | ||||| || || | |||||| | | ||||| ||| ||||| | Sbjct 74067 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 74126 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||| | || ||||||| || || ||||| || || |||||||| || || | Sbjct 74127 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGA 74186 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 ||||||| ||| | | ||||| || | ||| |||| | || |||||||||| Sbjct 74187 GCAGGAGAGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATTTCGGCCCAGTCCC 74246 Query 213088 ATCTGCCAGACAGGTCCTC-GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 | || |||| | | | || ||| | || | |||| ||| ||| Sbjct 74247 A-------GA---GTCCACTGGGAGTGACTCCCCAGAGATCGTATTGCAGCTCGCCCTTG 74296 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || |||||||||| ||| | ||||| || |||||||||| |||||||| || Sbjct 74297 CTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGAT 74356 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || || |||| |||||| || || || |||| ||||||||||||||||||| Sbjct 74357 CGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC- 74415 Query 213267 GGGGACGTGAAGGGCATCATC-ATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 |||| || | ||| | | | ||| ||| | || || || || | ||| ||||| Sbjct 74416 GGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGAT 74475 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 |||||||| | ||| | || ||| ||||| ||| | ||||| ||||| Sbjct 74476 ACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAGTTGAC 74535 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG-- 213443 |||||||||||||||||||||| | || ||||| || | | || | || | Sbjct 74536 ATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAA 74595 Query 213444 --------TGATTGAACACGTAGCCCCCGTCC---TGCACAAACTCAGGCAGGGCGATGC 213492 | ||| ||| | | ||| || || | |||||| || || | Sbjct 74596 GTCGTATGTCCTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATAC 74654 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 |||| |||||||| || || ||||| | | | |||||||||||||||| ||||||| Sbjct 74655 TGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACA 74714 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCT 213612 |||| ||| ||||||||| ||||||| ||||| ||||| ||| |||| |||| Sbjct 74715 GGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCT 74774 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 |||| |||||| | ||| || ||||| ||| | | | || | | ||| || | Sbjct 74775 TGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCT 74834 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732 |||||||| || | || || | | |||||||| |||||||| Sbjct 74835 TTTGAGCCTTGACGGTTCGGCGAGCACGACC---CTCACGCTCGTACTTCTCGTAGAGAG 74891 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792 | | ||| |||| ||| |||| | || || || || ||||| ||||| || Sbjct 74892 CCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCG 74951 Query 213793 TCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 ||| || |||| | | ||||| || |||||||| ||| |||| ||| || ||| || Sbjct 74952 ACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGA 75011 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | || || | || | ||| ||| || ||| || | || || || || || | Sbjct 75012 AGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA 75071 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGC 213969 ||| ||| | |||||| ||||| ||||||||||| ||||| || | || | ||||| | Sbjct 75072 AGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCAC 75131 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 |||| || || | || ||||||||| ||| || | || || | ||||| | Sbjct 75132 CCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAG 75191 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCC 214089 | ||||| ||||| || || || ||||||| | | | | | ||| ||| | Sbjct 75192 AGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 75251 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | |||||||| || |||| ||||||||||||| | | | ||| || ||||||| Sbjct 75252 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 75311 Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209 | || ||| || | | | | | || |||||| || | || || ||| | | Sbjct 75312 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 75371 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 ||| |||||| || |||||| ||||||| | | |||| | || | ||| |||| | Sbjct 75372 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAG 75431 Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCT--CATCAGCAT 214327 | || | | | | |||| | ||||| || || ||| || ||| ||||| Sbjct 75432 TGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCCGACAGCAACTCGCATGAGCAT 75489 Query 214328 GTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGCGCTC 214381 ||| ||||| | ||| | | |||| ||| ||| ||||| ||||||||||| Sbjct 75490 GTGTTGGGGGCGCTC--GGCGACCTT----GCCGTTGATGCGCAGCAGATAGGAGCGCTC 75543 Query 214382 CAGAGTCTTGAACCCAAAGTAG 214403 || |||||||| || |||||| Sbjct 75544 GAGGGTCTTGAAGCCGAAGTAG 75565 >seq47 Length=87938 Score = 168 bits (186), Expect = 1e-36 Identities = 365/536 (68%), Gaps = 20/536 (4%) Strand=Plus/Plus Query 47860 CTCA-AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGG 47918 |||| |||||||||||||| || | || ||||||||||||||||||| |||||| || | Sbjct 15256 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 15315 Query 47919 GTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCAGGTGATCCGCGACGTACTCG 47977 | ||| || | | || ||| | | ||||||| | || ||||| | ||| Sbjct 15316 TGGCGTTGTAGTGCT-TCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCG 15374 Query 47978 ATGTATTTTGACATGAGG-GTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGT 48036 ||||| | ||| || ||| ||||||||| || | || ||| | ||| | || Sbjct 15375 ATGTACTGGCTCATAAGTCGTGC-GTTCATGCCGATCAATGAACAGGGAAGAGCATCGGT 15433 Query 48037 GAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACG----CGGGACT 48092 || || ||| ||| || || | || | | || || |||| |||| Sbjct 15434 CAGGAAAGCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG-- 15491 Query 48093 CTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 || || | || ||| ||||| || |||||| ||| |||||||| |||||| Sbjct 15492 -TGCGGCCGCTTCTTG---AGGTGGCTGA---AGAGCAAGCAAGCAAAGTCGGTGTGCAG 15544 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || ||||| |||||||||||| ||||||||||| |||||| ||||||| || | || Sbjct 15545 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 15604 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 ||||||||||| || | ||||||||||| ||||||||||| ||||| || || || || Sbjct 15605 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 15664 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 || || | ||| | || | | || || ||| ||||||| || ||||| || Sbjct 15665 GGCAACCAGGCGCTCGGCAAAGGTGGAGTCCTCGTCGTTGATCCAGCGCAGGGCCCACTC 15724 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT 48386 ||||| | ||||| | || || ||||| || || |||||| | || || || Sbjct 15725 GGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCT 15780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931513400829440