Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1256 320 3e-82 seq47 170 4e-37 >seq1256 Length=115194 Score = 320 bits (354), Expect = 3e-82 Identities = 755/1121 (67%), Gaps = 27/1121 (2%) Strand=Plus/Plus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 || || || ||||| | |||||||| ||| | | ||| | |||| || || Sbjct 74303 GGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGATCGCTCG 74362 Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||| ||||| |||||| ||||||| ||||||||||||| | Sbjct 74363 AGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGG-GCT 74421 Query 221480 GTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 || | ||| || | || ||| |||||| ||||||| || || | ||||||||||||| Sbjct 74422 GTCGAAGGCGTAACCCATGATCATGAAAG-CGTCGGCGAGACCGTTGACTCCGATACCGA 74480 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | | ||||||| ||| || || || || || ||||||| |||| Sbjct 74481 TGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAGTTGACATCGA 74540 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||||||||||| | | ||| || |||||| ||||||| | | | Sbjct 74541 TGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAGTCGT 74600 Query 221658 ACACCAACTCGCCGCCGTCGTG-GAGGGGTTCC--ACAAAAGCGTTTAGGGCAACGCTGG 221714 | | || | ||| ||| ||| | | || ||| || || | |||| Sbjct 74601 ATGTC--CTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATACTGG 74657 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 | ||||| || || || ||||| ||| | | |||| |||||||| || || |||| Sbjct 74658 CAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGT 74717 Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGT 221834 | |||||||||||| || |||| || || || |||||||| || ||||||||||||| Sbjct 74718 TAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTGT 74777 Query 221835 AGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTC 221894 | ||||| || || |||||||||| ||||||| | |||| || ||| || | | Sbjct 74778 AAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTT 74837 Query 221895 TGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGT 221954 || | || || | | |||||| || | | | || || ||||| | Sbjct 74838 GAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTCG-TAGAGAGCCT-- 74894 Query 221955 CAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014 | |||| || ||||| | || | || || || ||| ||||| |||||||| || Sbjct 74895 CGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGACC 74954 Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074 | | ||| | || ||| | || |||||| | ||| |||||||| || || | |||| Sbjct 74955 ACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGA 75014 Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134 | || | || || ||||||| ||||| ||| ||||| || || | ||||| || | Sbjct 75015 GCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGA 75074 Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194 ||||| |||||| ||||| | |||| ||| | || || || |||||||||||||||| Sbjct 75075 CGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCT 75134 Query 222195 GATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 |||| | | | | || | |||||||| |||||| | || || | ||||| Sbjct 75135 GATCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 75190 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-ACA 222308 || |||||| || || |||||| | ||| | || | | | | ||| | | Sbjct 75191 GAGACACCGTTAGTTCCGGCAATGTATGAGCCG--GTACCACGGATGCAGTGGATGTTGA 75248 Query 222309 TGCCGATACCACC-GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 |||||| ||||| | ||| || | ||||||||||||| ||||||||||||| |||| Sbjct 75249 GGCCGATGCCACCAGCCGTCTTGC-TGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATG 75307 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 || || || ||||| ||||| | | | | ||| || || || ||||| |||| |||| Sbjct 75308 CCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGT 75367 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | || ||||| || || ||||| ||| || || ||||| Sbjct 75368 GTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA 75408 >seq47 Length=87938 Score = 170 bits (188), Expect = 4e-37 Identities = 186/247 (75%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 || || ||| ||| ||| | ||||| ||||| ||||||| || ||||||||| Sbjct 15760 GCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCAAC 15701 Query 25855 AGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTT 25914 | || | | || |||| |||||| ||||| ||||||||||| || ||||| ||||| Sbjct 15700 GACGAGGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTC 15641 Query 25915 TTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTG 25974 ||| ||| || || || ||||||||||||||||| || || ||||||||| || Sbjct 15640 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 15581 Query 25975 TACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| |||||||||||||||||| | ||||||||||| |||| || ||||| ||| || Sbjct 15580 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTG 15521 Query 26035 CTCTACA 26041 |||| || Sbjct 15520 CTCTTCA 15514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928825456807040