Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1256 181 1e-39 seq47 165 1e-34 seq1023 134 2e-25 seq424 105 8e-17 seq668 104 3e-16 >seq1256 Length=115194 Score = 181 bits (200), Expect = 1e-39 Identities = 275/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| ||||||||||| || |||| ||| |||||||| ||||| ||||||| ||||| || Sbjct 75133 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 75192 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | ||| | ||||| | || | ||| | | ||| Sbjct 75193 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 75252 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || |||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 75253 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 75312 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 |||||||||| |||||||| || || |||||||| || |||| |||| | || || Sbjct 75313 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 75372 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| ||| | ||||||| || ||| || Sbjct 75373 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 75432 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || | || |||| || || | ||| | | ||||| || || Sbjct 75433 GTCG------------ATGGCCTCGT---CGATGGAACTCCCGTGGATGCCGACAGCAAC 75477 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||||| ||||| |||||| |||| Sbjct 75478 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGAC 75510 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| ||| Sbjct 74997 TCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 75056 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 75057 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 75116 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 75117 GACGCTTGTTGCCACC 75132 >seq47 Length=87938 Score = 165 bits (182), Expect = 1e-34 Identities = 211/286 (74%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| |||| ||| ||||||||||| || ||||| Sbjct 15545 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 15604 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 15605 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 15664 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||||||||||||||| || | |||| | ||||||||| || ||||| Sbjct 15665 GGCAACCAGGCGCTCGGCAAAGGTG--GA-GTCCTCGTCGTTGATCCAGCGCAGGGCCCA 15721 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 |||||||||| | | | |||| || | || || || ||| ||||||| || | Sbjct 15722 CTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCT 15780 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| | || |||||||| ||||| || || ||||| Sbjct 15781 GTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTC 15826 Score = 118 bits (130), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||| ||||||||||| ||| | ||||||| | |||||||| ||||||| | Sbjct 15924 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTC 15983 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | ||||||||| |||||||| || |||||||| || || |||||||| |||| Sbjct 15984 GACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCGAAGAATGCGAGGACGTGGCTGAT 16043 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||| ||||||| |||| | | | |||||| | |||| | ||||| Sbjct 16044 GAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 16103 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||||||||| ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 16104 GATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 16154 Score = 102 bits (112), Expect = 1e-15 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 15261 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 15320 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| ||||| |||||||| ||||||||| Sbjct 15321 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 15380 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| ||| || | |||||||||||||| Sbjct 15381 TGGCTCATAAGTCGTGCGTTCATGCCGAT 15409 >seq1023 Length=133890 Score = 134 bits (148), Expect = 2e-25 Identities = 271/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||| |||| |||||||| ||| | || |||||||||||| |||| || || || Sbjct 57218 GTCACAACCTACGGCGAGTCTCACTGCGCCTCTGTCGGCTGCATCGTCGATGGTGTTCCC 57277 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| | ||| | || | || | |||| ||||| ||| | || || ||||| ||| Sbjct 57278 CCGGGTATGGCCCTCTCTGATGACGACGTCCAGGTCCAGCTCAGCCGTCGTCGACCCGGC 57337 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || || || |||||||| || Sbjct 57338 CAGTCCAACCTGACCACCCCGCGCGACGAGAAGGACCGAGTTCAGATCCAGTCCGGTGTC 57397 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || || ||| |||||||||| | ||| | | | | || |||| || |||||| Sbjct 57398 GAAAAGGGCATCACGCTCGGTACTCCCATTGCCATGCGCGTCCAGAACCAGGATCAGCGG 57457 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGTG---CCGCGGCCCTCACACGCCGACTAC 18381 ||| |||||| | || || | | | || ||||| ||||| ||||| |||||| Sbjct 57458 CCCAACGACTACACGGACCGCACGCTCGACTTGTACCCGCGTCCCTCTCACGCTGACTAC 57517 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| ||||||| ||||| ||||| ||| || || || Sbjct 57518 ACCTACCTCGAGAAGTACGGTGTCAAGGCTAGCTCGGGTGGAGGACGGAGCTCGGCTCGG 57577 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| | ||| || || || ||||| || || ||||| Sbjct 57578 GAGACGATTGGGCGTGTGGCTGCAGGCGCCGTGGCGGAGAA 57618 Score = 87.8 bits (96), Expect = 2e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 || ||||| || || ||||| || ||| |||||||| |||||| ||||||||||| || Sbjct 57947 GGTCTCGGTGAACCATGCTTCGATAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCTCC 58006 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| || ||||||| |||||| ||||| ||| || Sbjct 58007 ATCCCCGCTACCAAGGCCTTCGAGGTTGGCTCCGGCTT 58044 >seq424 Length=69107 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || |||||||| ||||||||||| | || Sbjct 18873 GCTTGGAGAGTTCACCGGGGAGGATAAGTCGGACGGCGGTTTGGATCTCGCGGGCAGAGA 18932 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| ||||||| |||| | Sbjct 18933 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGA 18992 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| || ||||||| || | ||| | |||||| ||||| || |||||||| Sbjct 18993 TGTCTTGGACGAAGGAGTTCAGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGT 19052 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 19053 GCACCTGCTTGAGGACACGGTAGATG 19078 >seq668 Length=61095 Score = 104 bits (114), Expect = 3e-16 Identities = 188/267 (70%), Gaps = 16/267 (6%) Strand=Plus/Minus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 16974 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 16915 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCA---CGCCGAGGCCGTGC 509030 | | || ||||| || ||| || |||||| || | | ||| || | Sbjct 16914 TGCCCT-----TCGGGTTCCGATACC---GGACGCTACCA-CATTTCACAAAGGACGA-C 16865 Query 509031 CGCCG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGC 509089 | | |||||||| || ||||||||| |||||||| ||| || |||| | | Sbjct 16864 TTCAGTCCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAA 16805 Query 509090 GAGATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 ||| | || | ||| || |||||| || ||||| ||| |||||||||| |||||||| Sbjct 16804 GAGTTTTTCTTCCACGCCAT-GGCGGGTCGTGAGGGTCTCATCGACACGGCTGTCAAGAC 16746 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||||||| ||||| ||||| || Sbjct 16745 GGCCGAGACGGGATACATTCAGCGACG 16719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107002480238122