Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1256 163 3e-35 seq1377 125 6e-24 seq1001 111 1e-19 seq136 111 1e-19 seq923 93.3 4e-14 >seq1256 Length=115194 Score = 163 bits (180), Expect = 3e-35 Identities = 974/1527 (64%), Gaps = 66/1527 (4%) Strand=Plus/Plus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | ||| || || || ||||| | || || || ||||| |||| | ||| |||| Sbjct 74068 GTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAGG 74127 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 |||||| | |||||| || || |||||| || | || || ||||| || | Sbjct 74128 CTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGAG 74187 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTC-CTTGAGCGACGACCAGTCCC 138679 || ||||| || || | |||||| || | | | | ||||| | |||||||| Sbjct 74188 CAGGAGAGAGTTTCGGAGACCGTGT-GCGGCAATGTTGCGCTTGATTTCGGCCCAGTCCC 74246 Query 138680 ACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGAC 138739 | | | || || | ||| | |||||| || | | ||| || | || | Sbjct 74247 AGAGTCCACTGGGAGTGACTCCCCAGAGATCGTATTGCAGCTCGCCCTTGCTGGTTGGGC 74306 Query 138740 TGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTT-GCTCGCCTCGAGC 138798 |||| ||||| | ||||| || | ||| | || | |||| | |||| ||||| Sbjct 74307 TGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGATCGC-TCGAGA 74365 Query 138799 GCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCG 138858 || | | ||| || || ||| ||||| |||||| |||||||| ||| ||| Sbjct 74366 GCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGGCTGTCG 74425 Query 138859 TACGGCATG-CGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGG 138917 | ||| | | | ||| |||| |||||||| || || | || || | |||| || Sbjct 74426 AA-GGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGATACCGATGGG 74484 Query 138918 GCGATGGCGCAGATTTGACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATG 138975 ||| ||||||| || ||| || | || || | | ||| || ||||| ||||||||| Sbjct 74485 GCGGTGGCGCATGTTGGAC--TTCTTCGCCTCGGGAACAGGGTAGTAGTTGACATCGATG 74542 Query 138976 ATTTTGTTTAAATTTCGCACGACC-ACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGT 139033 || ||||| | || | ||| | | ||||| || | | | | | | | || |||| Sbjct 74543 ATCTTGTTGAGGTTGC-CACAAACGACCTTGGTAACCT-CGTGGAGCTTCTTGAAGTCGT 74600 Query 139034 ATGTGCCCCCGTTGTCGT---CGA--CGACGTCGACAAATTTGTTGACACAA--ATCGAG 139086 |||| || || |||| ||| ||| || ||| | | | || | || | Sbjct 74601 ATGT--CCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAA--GAAGGCAGAGCCATACTG 74656 Query 139087 GCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAA 139146 || | |||||| || || || || || || ||||||| || | || || | |||| Sbjct 74657 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 74716 Query 139147 TTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTG 139206 ||| |||||||| || || | || | ||| || || |||||| ||| || ||| Sbjct 74717 TTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTG 74776 Query 139207 TAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCC 139266 |||||||| | || ||||||| ||| || | ||| | || | | | ||| Sbjct 74777 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGT--ACCAA---- 74830 Query 139267 CTAGCTTGTAT---TTGACGCA-CGTAAAGTTCG----TCGCGCTCGTACTTTTCGTAGA 139318 ||||| | |||||| || || || || ||||||||||| ||||||| Sbjct 74831 --AGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTCGTAGA 74888 Query 139319 GTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATG 139377 | | ||||| ||| || |||||| | |||| ||| || | |||| | || ||||| Sbjct 74889 GAGCCTCGAACTCG-TCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATC 74947 Query 139378 AGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCG 139437 |||||||| | |||||| | ||| ||| ||||||||| || || ||||| | ||| Sbjct 74948 AGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCG 75007 Query 139438 AACAGCAAATCGCGCGCCTTCTTA--TCTTCCGAACCCATGTTACGTTTCATGTTAAGGA 139495 | | | || || || || | || ||| || ||| | | || |||| Sbjct 75008 TAGAAGAGCTCACGGGC--TCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGA 75065 Query 139496 AATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TT 139552 | || || ||||||| |||||| || || | |||||||| | || ||| || | Sbjct 75066 ACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGT 75125 Query 139553 TGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGAC 139612 ||||||| |||||||||| || | | || ||||| ||||| | ||| ||| | | || Sbjct 75126 TGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATAC 75185 Query 139613 CGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGT 139668 || | | ||||| || || | | ||| | | || | | |||| | || Sbjct 75186 CGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGT----ACCACGGATGCAGTGG 75241 Query 139669 ACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATCGCGTAATGTCTC 139727 | |||| |||||| || || | ||| || | |||| || | | || || Sbjct 75242 ATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTG-AGAGTGTC 75300 Query 139728 GTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGG 139787 ||| || || || |||||||| ||| |||||||| ||||| || || | ||| || Sbjct 75301 GTAGATGCCGTCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGG 75360 Query 139788 TAGTTTCGTG--CCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGAC 139845 ||| ||| || || || || || || || || ||||| | | |||| Sbjct 75361 --GTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGAC 75418 Query 139846 ATCAATTCGTACGTTTCGATGGCGCTC-ACAATATCCCTTCCGTGGATACCGACAGAGAC 139904 || | | ||| || |||||||| ||| | || || |||||||| ||||||| || Sbjct 75419 ATGAGGTTGTAAGTGTCGATGGC-CTCGTCGATGGAACTCCCGTGGATGCCGACAGCAAC 75477 Query 139905 TCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACC 139964 |||||| ||||| |||||| || ||||| ||| ||| | ||| |||||| Sbjct 75478 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGCAGCAGATAGGA 75537 Query 139965 GTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 | ||| ||||||||| |||| ||||| Sbjct 75538 GCGCTCGAGGGTCTTGAAGCCGAAGTA 75564 >seq1377 Length=3727 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || | || Sbjct 2799 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 2740 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | ||||| |||||||| ||||| || || || ||||| || ||| Sbjct 2739 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 2680 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| ||||| || ||| |||||||| | | | | || ||||| ||| Sbjct 2679 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 2620 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || |||||||| | || | ||||| || Sbjct 2619 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGG 2573 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || |||||||| ||| | | Sbjct 3027 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAATCATCA 2968 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || ||| Sbjct 2967 GACACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAA 2908 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| || ||||| ||||| ||| | | || || || ||| Sbjct 2907 CAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAAC 2848 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || ||| | |||||||| Sbjct 2847 ATCCAGAAGGAGTCCACATTGCACTTGGT 2819 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || || ||||| || ||| | | Sbjct 2571 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 2512 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 2511 GACACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 2452 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| || || || ||||| || || | | | | || || || ||| Sbjct 2451 CAACGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAAC 2392 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||||||||| || || || || ||||| Sbjct 2391 ATTCAAAAGGAGTCCACTCTTCATTTGGT 2363 >seq1001 Length=137376 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| ||||| || || Sbjct 40782 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 40841 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || |||||||||||||| || || || || || || || Sbjct 40842 GACACGATTGACAACGTCAAGAC-CAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 40900 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| ||||| || ||||| || || ||| | || || || || Sbjct 40901 ACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAA 40960 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| ||||| ||||| || || ||| Sbjct 40961 CATCCAAAAAGAATCCACCCTCCAC 40985 >seq136 Length=82364 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || |||||||| ||| | | Sbjct 3656 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 3715 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || |||||||| ||||| || || || ||||| || || Sbjct 3716 GACACCATCGACAACGTCAAGAC-GAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 3774 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || | || || ||||| || || || || || ||| | | || || || || Sbjct 3775 ACAGCGCCTTATTTTCGCCGGAAAGCAACTCGAAGACGGCCGAACCCTCTCCGACTACAA 3834 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || |||||||| | || ||||||| || Sbjct 3835 CATTCAGAAGGAGTCCACTCTTCACTTGGTTCTTCGTCTGCGCGGTGG 3882 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || ||||| || | | Sbjct 4112 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCA 4171 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| || ||| Sbjct 4172 GACACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 4231 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| |||||||| ||||| || ||||| || || | | | || || || ||| Sbjct 4232 CAACGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACAAC 4291 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| || ||||| || ||||| | || | ||||| ||| Sbjct 4292 ATCCAAAAGGAGTCCACACTTCATTTGGTCCTCCGTCTCCGCGGTGGC 4339 >seq923 Length=148606 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| ||||| || ||||| || || | || Sbjct 98311 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 98252 Query 24764 GACACAGTAGAAACGGT-AAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| | | || | || || || ||| ||||| ||||| ||||| || || || || || Sbjct 98251 GACTCCATCGACGCCGTCAAGACCAAA-ATCCAGGACAAGGAAGGTATCCCCCCGGACCA 98193 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | ||||| ||||| || ||||| ||||| | | | || || || || Sbjct 98192 GCAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 98133 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || ||| | ||| | || |||| || || Sbjct 98132 CATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCGCCTGCGTGGTGG 98085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888230882480