Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq47 179 6e-39 seq424 156 7e-32 seq1256 136 6e-26 seq829 123 4e-22 seq668 104 4e-16 seq1578 100 5e-15 >seq47 Length=87938 Score = 179 bits (198), Expect = 6e-39 Identities = 220/300 (73%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| ||| ||| ||||||||||| || ||||| Sbjct 15545 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 15604 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 15605 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 15664 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||||||||| ||| | |||| | ||||||||| || ||||| Sbjct 15665 GGCAACCAGGCGCTCGGCAAAGGTG---GAGTCCTCGTCGTTGATCCAGCGCAGGGCCCA 15721 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||||| | | || ||| | || || || ||| ||||||| || || Sbjct 15722 CTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATCGCGTCGAAGAGGTACTCGCGCTG 15781 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | ||||| | ||| |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 15782 TGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTC 15841 Score = 111 bits (122), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | | |||||||| |||| || || | |||||||| |||||||| Sbjct 15949 GCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTCGACGAGGTTCTCGTTGACGATGCCA 16008 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||||| || ||||||||||| |||| ||||| ||||||| |||| | | | Sbjct 16009 TCTGACGCGGCGAAGAATGCGAGGACGTGGCTGATGAAGTGTCGCTCGTTGTCGTTCAAC 16068 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| ||||||||| ||||| || || Sbjct 16069 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCGGCCGTCCAGAACGAT 16128 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 16129 GCCTCTGCCTTCTTGTACATTTGCCAGATC 16158 Score = 93.3 bits (102), Expect = 7e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 15261 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 15320 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 ||||||||||||| |||||| | | ||||| ||||| ||||| ||||| |||||| Sbjct 15321 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 15380 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGAT 794077 |||| ||| || |||||||||||||| Sbjct 15381 TGGCTCATAAGTCGTGCGTTCATGCCGAT 15409 >seq424 Length=69107 Score = 156 bits (172), Expect = 7e-32 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||| |||||||||||| |||| ||||||| ||| ||||| ||| | | Sbjct 18835 GTACTTGGTGACGGACTTGGTACCCTCAGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 18894 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || |||||||| ||||||||||||| ||| || |||||| | Sbjct 18895 GATAAGTCGGACGGCGGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 18954 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| ||||||| |||| ||||| | ||| || ||||||| Sbjct 18955 TGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGATGTCTTGGACGAAGGAGTTCAG 19014 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 19015 GATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 19068 >seq1256 Length=115194 Score = 136 bits (150), Expect = 6e-26 Identities = 185/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| ||||| || |||| ||| |||||||| ||||| ||||| | ||||| || Sbjct 75133 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 75192 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||| || || || | ||| | ||| | | || | ||| | | ||| Sbjct 75193 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 75252 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || |||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 75253 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 75312 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| |||||||| | ||| |||||||| || |||| ||| | || || Sbjct 75313 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 75372 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || |||||||| ||||| Sbjct 75373 AGCGTTGAAGAGGGTGGG 75390 Score = 98.7 bits (108), Expect = 2e-14 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCG 2071859 || ||||| ||| | ||||| | |||||||| || ||| | || | || || Sbjct 74921 AGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTCTCCGTTCTGTT-CGACTCGCTT 74979 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| ||| |||| ||| |||| ||||| || || || ||| ||||||||| Sbjct 74980 CATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTT 75039 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| | |||||||| | |||| || ||| | |||||| ||||| | ||| Sbjct 75040 GCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTA 75099 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||| ||||| || |||||| ||| || Sbjct 75100 GATGGCGAAGGCACCTGGACGCTTGTTGCCACC 75132 >seq829 Length=36737 Score = 123 bits (136), Expect = 4e-22 Identities = 170/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 18959 GTACTTGGTGACCGACTTGGTCCCCTCCGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 18900 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| || ||||||||||| | | ||| ||| | |||||| || | Sbjct 18899 GATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGATGGTGCTCTTCTTGTT-GTATG 18841 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | || |||| ||||||| |||| ||||| | || || ||||| | Sbjct 18840 ATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGATGTCTTGTACGAAGGAGTTGA 18781 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||||||||| || ||||||||| || ||||| || || Sbjct 18780 GGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGAACTTGCTTAAGGAC 18726 >seq668 Length=61095 Score = 104 bits (114), Expect = 4e-16 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || ||||||||| |||||||| ||| || |||| | | ||| | Sbjct 16858 CCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAAGAGTTT 16799 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| || ||||||||| |||||||||| |||||||||||||| Sbjct 16798 TTCTTCCACGCCAT-GGCGGGTCGTGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 16740 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 16739 GACGGGATACATTCAGCGACG 16719 >seq1578 Length=95506 Score = 100 bits (110), Expect = 5e-15 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 |||||||||||| | || ||| || |||||||||| | |||| || || || ||| Sbjct 17494 TCAATCTTGGAGTCCGCATCGGAGGAGCTCATCTTGGAGCCCTTA---AGACCGGGTACC 17438 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | || ||| |||||| |||||| ||| |||||| || ||| Sbjct 17437 ATGGCGTTCATGAGATGGGCGCGCTTTGCGTAGCCGAGCTTAGGCAGGACCTCCTCGGCA 17378 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | ||||| || ||||||||| || || || ||| ||||||| |||||| |||| Sbjct 17377 AGGACGAAGATTTTTCGCTGGTCGACACCTCCGAATTGGAAGTCGACGCCGAGGTACTGC 17318 Query 2411566 TCGTCGAGGGCCTGCATGAGC-GGGTAGACGAG 2411597 |||||||| || || | || | ||||||| ||| Sbjct 17317 TCGTCGAGCGCTTGGA-GACCGGGGTAGATGAG 17286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916069179981374