Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq136 93.3 4e-14 seq1377 84.2 2e-11 >seq136 Length=82364 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 137182 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 137241 ||||| || || | ||| | || ||||||| ||| || || ||||| |||||||| || Sbjct 4341 TGGCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCA 4282 Query 137242 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 137301 | || | ||||||||| || || || || |||||| ||||| || || ||| Sbjct 4281 GAGAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGA 4222 Query 137302 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCT 137361 || ||||| || ||||| ||| || || | | || | ||||||| | || Sbjct 4221 GGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCG 4162 Query 137362 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||||| || | ||||||||||| | || || ||||| || |||||| Sbjct 4161 ACTTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 4111 >seq1377 Length=3727 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || || | ||| | || ||||||| || || || ||||| |||||||| || Sbjct 2344 GCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 2403 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | |||| ||||||||| || || || || |||||| |||||||| || || || Sbjct 2404 AAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGG 2463 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||||| || ||||| ||| || || | | || | ||||||| | ||| || Sbjct 2464 GATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCAC 2523 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | ||||||||||| | || || ||||| || |||||| Sbjct 2524 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCATA 2572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488533826071200