Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq136 105 4e-18 seq1377 93.3 3e-14 >seq136 Length=82364 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || |||||| ||| || || |||||||| ||||| Sbjct 3883 ACCACCGCGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 3824 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || |||| || | ||| |||||||| ||||| | ||||| || || | || Sbjct 3823 GAGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGG 3764 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || ||| || | || | ||| | |||||| |||||| | Sbjct 3763 AATGCCCTCCTTGTCCTGGATCTTC-GTCTTGACGTTGTCGATGGTGTCTGATGATTCAA 3705 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 3704 CTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 3655 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||||| || ||| ||| ||||| |||||||| || ||| Sbjct 4338 CCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAG 4279 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| |||| || | || || ||||| || ||||| || || || || | || Sbjct 4278 AGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 4219 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| ||| || |||| ||| ||| | |||||| || || || Sbjct 4218 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCA-CATTGTCGATGGTGTCTGAAGACTCGAC 4160 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | || || || |||||||||||| Sbjct 4159 TTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 4111 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || || ||| || || ||||||||||| || Sbjct 4111 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 4052 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | || || ||||| || || | |||||||| || | || Sbjct 4051 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 3992 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || ||| || | || | ||| | ||||| |||||||| Sbjct 3991 AATGCCCTCCTTGTCCTGGATCTTC-GTCTTCACGTTGTCGATAGTGTCTGATGATTCCA 3933 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || || ||||||||| Sbjct 3932 CCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCATA 3883 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || || ||| ||| ||||| |||||||||||||| Sbjct 3655 ACCACCACGCAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGA 3596 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | ||| || ||||| || || | ||||| || || | || Sbjct 3595 AAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGG 3536 Query 33642 CACACCTTCTTTGTC 33656 | ||| || ||||| Sbjct 3535 GATACCCTCCTTGTC 3521 >seq1377 Length=3727 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||||| || |||||| ||| || || |||||||||||||| Sbjct 2572 ACCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGA 2631 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || ||||| || || ||||| || ||||| || || || || | || Sbjct 2632 AAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 2691 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | |||| ||| | |||||| |||| Sbjct 2692 AATGCCCTCCTTGTCCTGGATCTT-GGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCA 2750 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | || || || |||||||||||| Sbjct 2751 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 2800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697325870720