Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1377 129 1e-24 seq136 100 7e-16 seq447 91.5 3e-13 seq923 87.8 4e-12 >seq1377 Length=3727 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | || ||||| || || ||| Sbjct 2796 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCCGAC 2737 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || || || || ||| |||||| ||| Sbjct 2736 ACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 2677 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| ||||| | || | ||||||||||| || Sbjct 2676 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 2617 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||||||| Sbjct 2616 CAGAAGGAGTCCACTCTTCAC 2596 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| ||| || ||| Sbjct 3024 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAATCATCAGAC 2965 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || || |||||| || Sbjct 2964 ACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAG 2905 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||||||||||||| | || || || | || | |||| |||||| || Sbjct 2904 CGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATC 2845 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || | ||| | ||| | | ||||| Sbjct 2844 CAGAAGGAGTCCACATTGCACTTGGTTCTCCGCCTTCG 2807 >seq136 Length=82364 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| || ||| ||| Sbjct 4115 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCAGAC 4174 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| |||||| ||| Sbjct 4175 ACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 4234 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| | ||||| ||| | ||| | | || |||||| || Sbjct 4235 CGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACAACATC 4294 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || ||||| || ||||| Sbjct 4295 CAAAAGGAGTCCACACTTCA 4314 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| ||| || ||| Sbjct 3659 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCAGAC 3718 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 3719 ACCATCGACAACGTCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 3778 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||| |||||||||||||| | ||||| || | || | |||| |||||| | Sbjct 3779 CGCCTTATTTTCGCCGGAAAGCAACTCGAAGACGGCCGAACCCTCTCCGACTACAACATT 3838 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| ||||||||| | ||| Sbjct 3839 CAGAAGGAGTCCACTCTTCACTTGGTT 3865 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || |||||| || ||| Sbjct 3887 CAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCAGAC 3946 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 3947 ACTATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 4006 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || || || | ||| | | ||||||||| || Sbjct 4007 CGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAACATC 4066 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| || |||||| | ||| Sbjct 4067 CAGAAGGAGTCAACGCTTCACTTGGTT 4093 >seq447 Length=69015 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || |||||||| | || || || || ||| | |||| | Sbjct 19643 CAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGACGC 19584 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||| ||| |||||| || | || ||||| Sbjct 19583 CGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCATCTT 19524 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || | || | |||| |||||| ||||||| ||||| Sbjct 19523 CGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAGTC 19464 Query 206364 TACTCTTCAC 206373 ||||||||| Sbjct 19463 CACTCTTCAC 19454 >seq923 Length=148606 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || ||||| ||| ||| Sbjct 98308 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 98249 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| || || || || || ||||| || |||||| || Sbjct 98248 TCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 98189 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| ||||||||||| |||||| | || || || | ||| | | || |||||| || Sbjct 98188 CGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACATC 98129 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| ||||| || Sbjct 98128 CAGAAGGAGTCGACTCTCCACCTCGT 98103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181795573296386