Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq47 167 3e-35 seq424 109 8e-18 seq829 91.5 2e-12 >seq47 Length=87938 Score = 167 bits (184), Expect = 3e-35 Identities = 220/297 (74%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||| ||||| || || ||||| ||||| |||||||| ||| | ||||| | Sbjct 15841 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 15782 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC-GTCGGTGAGGAAAAAGGCCGA 1456133 || || ||||||| ||| || || || | || |||| | | | |||||||||| Sbjct 15781 CAGCGCGAGTACCTCTTCGACGCGATGGAGACCATTCCCGTCG-TCAAGCAAAAGGCCGA 15723 Query 1456134 CTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGC 1456193 ||||| || ||||||||| | |||| | || || |||||||||||| || || | | Sbjct 15722 GTGGGCCCTGCGCTGGATCAACGACGAGGAC-TCCAC-CTTTGCCGAGCGCCTGGTTGCC 15665 Query 1456194 TTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAG 1456252 ||||| || || ||||| ||||| ||||| ||| |||| | ||||||| ||||||||| Sbjct 15664 TTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAG 15605 Query 1456253 AAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||| || ||||||||||||| || ||| |||||| | ||||| || ||||| Sbjct 15604 AAGCGTGGTCTCATGCCCGGTC-TCACCTTCTCCAACGAGCTCATCAGCCGAGACGA 15549 Score = 122 bits (134), Expect = 1e-21 Identities = 171/237 (72%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||| || || ||||| ||||||||| |||||| Sbjct 16158 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACC 16100 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| | | |||||| | ||| |||| ||||||| || ||||||| Sbjct 16099 TTTCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCA 16040 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||||||| || || |||||| ||||||||||| ||||||||| | || Sbjct 16039 GCCACGTCCTCGCATTCTT-CGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAG 15981 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 || || | ||||||||| ||||||| || | || ||||| ||||| ||| Sbjct 15980 CGGTTCAGCTCAGAGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 15924 Score = 87.8 bits (96), Expect = 3e-11 Identities = 113/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645 |||||||||||||| || || ||| |||||||||| |||||| ||||| ||||| |||| Sbjct 15409 ATCGGCATGAACGC-ACGACTTATGAGCCAGTACATCGAATTT-GTCGCTGACCGACTGC 15352 Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705 | | || ||||| || ||||||||||| | | || || ||| | |||||| Sbjct 15351 TGGTAGCCCTCGGGAACG-AGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAG 15293 Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTT 1456737 |||||||| | |||||||| ||||| || Sbjct 15292 AACATCTCGCTGCAAGGCAAGACAAACTTCTT 15261 >seq424 Length=69107 Score = 109 bits (120), Expect = 8e-18 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || |||||||||||||||||| || | | ||| || |||||| | Sbjct 19077 ATCTACCGTGTCCTCAAGCAGGTGCACCCCGACACTGGT-----ATC-TCAAACAAGGCT 19024 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| | ||| ||||||| || ||| | ||||| |||| ||||||| |||||||| Sbjct 19023 ATGGCCATCCTGAACTCCTTCGTCCAAGACATCTTCGAGCGCATCGCATCCGAGGCCTCC 18964 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || || ||||||| || ||| | ||||||||||| |||||||| Sbjct 18963 AAGCTTGCATCCTACAACAAGAAGTCGACCATCTCTGCCCGCGAGATCCAAACCGCCGTC 18904 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| ||||| ||| ||||||| |||| ||||| |||| Sbjct 18903 CGACTTATCCTCCCCGGTGAACTCTCCAAGCACGCCATCTCTGAGGGTACCA 18852 >seq829 Length=36737 Score = 91.5 bits (100), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 |||||||||| ||||| | ||| | ||||| || || | ||||| |||| ||||||| Sbjct 18758 CTCCAACAAGGCCATGGCCATCCTCAACTCCTTCGTACAAGACATCTTCGAGCGCATCGC 18817 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 |||| || || || | ||||||| | ||| ||| | | |||||||| Sbjct 18818 ATCCGAAGCTTCCAAACTCGCATCATACAACAAGAAGAGCACCATCTCCGCACGCGAGAT 18877 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||| || ||||| || || ||| | | ||| ||||| ||| ||||||| |||| ||||| Sbjct 18878 CCAAACAGCCGTCCGACTCATCCTCCCCGGTGAACTCTCCAAGCACGCCATCTCGGAGGG 18937 Query 725138 CACCA 725142 |||| Sbjct 18938 GACCA 18942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177650511237892