Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1377 116 3e-21 seq136 114 1e-20 seq923 89.7 5e-13 >seq1377 Length=3727 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||||||||||||||| || | Sbjct 2345 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 2404 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| ||||| || ||||| || |||||||||| || Sbjct 2405 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGG 2464 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||| | | | | | ||||| ||||||||| Sbjct 2465 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACC 2524 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || |||||||| Sbjct 2525 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 Score = 109 bits (120), Expect = 5e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || | || |||| |||||| || || || Sbjct 2608 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 2667 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || || ||||||| ||||| || |||||||||| |||||| ||| | | | Sbjct 2668 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATT 2727 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| |||| |||||||| | ||||| || || || || | || || Sbjct 2728 GTCGATCGTGTCGGAGCTC---TCCACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTT 2784 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 2785 GACGAAGATCTGCAT 2799 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||||| | ||| || |||| || || ||||| || || || Sbjct 3064 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 3123 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| ||| | || |||||||||| |||||| ||| | | | Sbjct 3124 GATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATT 3183 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || |||| ||| || || Sbjct 3184 GTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 3243 >seq136 Length=82364 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| |||||| || ||||||||||| | | || || |||| || Sbjct 4092 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCA 4033 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | ||||||||||||| ||||| || |||||||||| | Sbjct 4032 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 3973 Query 35648 ATCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| |||| | | ||||| ||||||||||| | ||||| || || Sbjct 3972 ATCTTCGTCTTCAC-GTTGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 3914 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || |||||||| Sbjct 3913 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | |||||| |||| || || ||||| || || || Sbjct 3847 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAA 3788 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| ||||| || |||||||||| |||||| ||| | || Sbjct 3787 AATAAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGTCTTGA-CGT 3729 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| ||||| || || | ||||| || || || || | || || | Sbjct 3728 TGTCGATGGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA 3669 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3668 CGAAGATCTGCAT 3656 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||||| | ||| || |||| || || ||||| || || || Sbjct 3619 CTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 3560 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||||| ||| | | |||||||||| |||||| ||| | | | Sbjct 3559 GATGAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACATT 3500 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || |||| ||| || || Sbjct 3499 GTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 3440 >seq923 Length=148606 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | || || |||| || |||||||| || || || Sbjct 98120 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 98179 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| ||| || ||| | | Sbjct 98180 GATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 98239 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||| || |||||||| | ||||| || |||||||||| || || || Sbjct 98240 GTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGAC 98299 Query 35725 AAATATCTGCATTCTGTGC 35743 || |||||||| ||| || Sbjct 98300 GAAGATCTGCATGCTGGGC 98318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450784212223280