Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq47 109 2e-18 seq1256 86.0 2e-11 >seq47 Length=87938 Score = 109 bits (120), Expect = 2e-18 Identities = 131/177 (74%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||||| || || || ||||||| || || || | || || |||| Sbjct 15689 CACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCT- 15631 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| ||||||||||||||| | || |||||||| || |||| |||||| ||||| | Sbjct 15630 CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCA 15571 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 |||| || ||||| || ||||||||| |||| |||||| || || | |||| || Sbjct 15570 ACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA 15514 >seq1256 Length=115194 Score = 86.0 bits (94), Expect = 2e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || ||||||||| ||||||||||||||||| || ||| ||| || Sbjct 75177 CCTATGCTTCGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGT 75118 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 ||||| || ||| |||||||| | ||||| |||||| | ||| Sbjct 75117 CCAGGTGCCTTCGCCATCTACATTGAGCCCTGGCACTCTGAC 75076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588302095975370