Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1256 163 4e-35 seq47 113 6e-20 >seq1256 Length=115194 Score = 163 bits (180), Expect = 4e-35 Identities = 554/849 (65%), Gaps = 27/849 (3%) Strand=Plus/Plus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||||||| | | ||||||| | || || || || | ||| || Sbjct 74663 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTAGAG 74722 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT-GCACGCATCCTTGTAGAG 111369 | ||| || || || | ||||||||||| ||| ||| ||| || |||||||| || Sbjct 74723 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCA-GCGTCCTTGTAAAG 74781 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGG 111428 |||| | || | || ||||||||||| | | ||||| || | ||||| | | | | Sbjct 74782 CATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGAGC 74841 Query 111429 CTGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 || | || | |||| || || ||||| ||||||||| |||||| || || || Sbjct 74842 CTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAA 74898 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 111546 ||| || || | || | |||||| || || | || || | || ||||| | Sbjct 74899 CTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTC 74958 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || | || || ||||||||||| | ||| || ||||| |||| | ||||| || Sbjct 74959 TCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTC 75018 Query 111607 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 75019 ACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTC 75078 Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 111720 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 75079 AGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTG 75135 Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780 || || ||||| || ||| ||| || ||||||||||| || | ||||| | || Sbjct 75136 ATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGAC 75195 Query 111781 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCC 111836 ||| || || || ||| | | | | | ||| || || ||||||| | | Sbjct 75196 ACCGTTAGTTCCGGCAAT----GTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 75251 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 | || || |||||| ||| ||| || || | | ||||| | ||||| |||| Sbjct 75252 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 75311 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 ||| ||||| ||||| ||| || |||||||| ||||| || || | ||||||| Sbjct 75312 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 75371 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 112015 |||| ||||||||||| || | || || |||| ||| | | ||||| || ||| Sbjct 75372 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGTAA 75430 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 || || | | | || ||| |||||||||||||| || || ||||||| |||| Sbjct 75431 GTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCATG 75490 Query 112076 TACTGTGGG 112084 | || ||| Sbjct 75491 TGTTGGGGG 75499 >seq47 Length=87938 Score = 113 bits (124), Expect = 6e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || |||||| ||||| Sbjct 15528 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 15587 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||| Sbjct 15588 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 15647 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||| || ||||| |||| ||||| ||||| |||| Sbjct 15648 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGG 15687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628018921233600