Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1256 279 6e-70 seq1500 102 9e-17 >seq1256 Length=115194 Score = 279 bits (308), Expect = 6e-70 Identities = 480/689 (70%), Gaps = 6/689 (1%) Strand=Plus/Minus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || ||| | || ||||| |||||||||||||| ||||||| ||| Sbjct 75411 AAGTACTTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATG 75352 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||||| | |||||||| ||||||||||||||||||||||| || ||| Sbjct 75351 TCATCGTGCTTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCTC 75292 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTC 53446 ||| || ||| ||| |||| | | ||||| ||||| || || | | || Sbjct 75291 AAGACCTGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATC 75232 Query 53447 CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATG 53506 |||| | |||| || || || || ||||| ||| | | || |||||||||||| Sbjct 75231 CGTGGTACCGGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATG 75172 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGG 53565 || ||||||||||||||||| || || |||||| | |||||||| ||||| | ||| Sbjct 75171 CTTCGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGT 75112 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | | |||||||||||| | ||||| |||||| | ||| | | ||||| ||||| || | Sbjct 75111 GCC-TTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAG 75053 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTC 53684 ||| || || | || ||| | || |||||| || || ||| || || ||||| | Sbjct 75052 GAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTAC-GCCCTTTGGATCC 74994 Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744 | ||| | |||||| | || || || ||| ||||||| ||||||||||| | Sbjct 74993 CTGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTG 74934 Query 53745 AGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACG 53804 |||||||||| ||| | ||||||||| || ||||| | | | || || ||||| Sbjct 74933 AGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACG 74874 Query 53805 CAGTTCAGGGCCGCTACAAGAAGAA-GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTC 53863 | |||| || | | | ||| |||||||| | || | ||| | || | ||| Sbjct 74873 AGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTC 74815 Query 53864 AAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAG 53923 || ||| |||||| || | || | |||| |||||||| | | ||| ||| Sbjct 74814 GAGGCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAG 74755 Query 53924 AGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||||| |||||| ||||| |||||| Sbjct 74754 TCGAACCAAAAGAACCTCGGCACCATCAA 74726 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/203 (71%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGT 55786 |||||| | ||| ||| ||||||||||| | |||||| ||| | || |||||| | Sbjct 73955 TCAAGGCACTGTACAAGACAGTGTGGGAGATCTCGCAGAAG-GTCATCATCGACATGGCT 73897 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGA-GAATCC 55845 || || || ||||| | ||| ||| || || |||||||||| | | | | | || Sbjct 73896 GCCGACCGAGGTGCCTTTATCTGCCAATCTCAAAGTCTGAACATCCACCTCCAAGCACCC 73837 Query 55846 TTCACTGGCCAAGTT--GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 | |||||| || |||| |||||||| ||||| |||||||||||| | |||||| Sbjct 73836 AGCTTTGGCCAGCTTACGAGC---ATGCACTTCTACGGCTGGAAGAAGGGATTGAAGACG 73780 Query 55904 GGTATGTACTATCTGCGGACCCG 55926 || | ||||| || || ||||| Sbjct 73779 GGAACATACTACCTCCGAACCCG 73757 >seq1500 Length=98849 Score = 102 bits (112), Expect = 9e-17 Identities = 149/204 (73%), Gaps = 10/204 (5%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAA 152084 ||||| ||||| || ||||| ||||| ||||||||||| || || || || || || Sbjct 88030 GTGAAAATGTAACG--AGCTGAGGCCGCGTCCTTGCCACCCATGGCA--CGAGTGCCGAA 88085 Query 152085 CTGTCC-AGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAAT 152143 ||| || | |||| |||||| |||| ||||| ||||| ||| | |||||||||| Sbjct 88086 CTGGCCGATAGGG-GCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAAT 88144 Query 152144 TCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGT 152203 ||||||||||| |||||||| || ||||| || || || || ||||| | | | Sbjct 88145 TCACAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACAT 88204 Query 152204 ATCCCGCCAACTGCGCCACCTTCA 152227 | || ||||| || || |||| || Sbjct 88205 AACCAGCCAATTGGGCAACCTGCA 88228 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAG--ACGCGTACCGAATT 117362 |||||||||||||||| || || ||||||||||| || | ||| || ||||| | Sbjct 88030 GTGAAAATGTAACGAGCTGAGGCCGCGTCCTTGCCACC--CATGGCACGAGTGCCGAACT 88087 Query 117363 GTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 | || | || | | || ||| ||||| ||||| |||| ||||||||| || | Sbjct 88088 GGCCGATAGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATTCA 88147 Query 117423 CAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482 ||||||| ||| || || ||| || || || || || || ||||| |||| || | Sbjct 88148 CAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATAAC 88207 Query 117483 CCGCCAGCTGAGCCACCTTCA 117503 | |||| || || |||| || Sbjct 88208 CAGCCAATTGGGCAACCTGCA 88228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204604226800