Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1377 203 8e-47 seq136 179 9e-40 seq1001 167 5e-36 seq447 167 5e-36 seq923 156 1e-32 seq1256 89.7 1e-12 >seq1377 Length=3727 Score = 203 bits (224), Expect = 8e-47 Identities = 172/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| ||||| | |||||| | ||||| Sbjct 2588 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 2647 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| | ||||||||||| ||||||| || ||||||||| Sbjct 2648 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 2707 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| ||||| || ||||| |||||||| ||| Sbjct 2708 TGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTC 2767 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 2768 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||||||||| ||||| ||||| || |||| |||||| | || ||| Sbjct 2360 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCT 2419 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||||| ||||| || || | || ||||||||| Sbjct 2420 TCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 2479 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || |||||||| || ||| |||||||| ||||| ||| Sbjct 2480 TGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 2539 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 2540 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| || |||||||| ||||| | |||||| | || || Sbjct 3044 AGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 3103 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| || || |||||||| ||||| | || ||||||||| Sbjct 3104 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 3163 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || || || ||||| ||||| ||| ||||||||||| ||||| ||| Sbjct 3164 TGAATCTTTGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 3223 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 3224 TTGCCAGTCAGAGTCTTGAC 3243 Score = 161 bits (178), Expect = 2e-34 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | |||||||| || |||||||| || || | ||||| Sbjct 2806 ACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 2865 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || |||||||| || |||||||||||||| |||||||| ||||| | || Sbjct 2866 TCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCC 2925 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| |||||||| || || || ||||| ||||| || |||||| ||||| Sbjct 2926 CTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAG 2985 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 2986 TGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3027 >seq136 Length=82364 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||||||||||||||| || || ||||| || || | ||||| | || ||| Sbjct 3867 AGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 3808 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||| |||||||| |||||||| ||||||| || ||||||||| Sbjct 3807 TCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 3748 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || |||||| ||||| ||||| ||| Sbjct 3747 TGGATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCAACTTCGAGTGTGATGGTC 3688 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 3687 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || ||||| || |||||||| ||||| | ||| || | || || Sbjct 4095 AGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCC 4036 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| ||||||| || ||||||||| Sbjct 4035 TCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 3976 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||| ||||| || ||| |||||||| ||||| ||| Sbjct 3975 TGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 3916 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 3915 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || |||||||| ||||||||||| ||||| | |||||| | || || Sbjct 3639 AGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 3580 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| |||||||| ||||| |||||||| ||||| | || ||||||||| Sbjct 3579 TCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 3520 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || |||||||| || ||||||||||| ||||| ||| Sbjct 3519 TGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTC 3460 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || |||||||| || Sbjct 3459 TTGCCAGTCAGAGTCTTAAC 3440 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||| |||||||| ||||||||||| || || | || || | ||| ||| Sbjct 4323 AGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCT 4264 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| | ||||||||||| ||||||| || ||||||||| Sbjct 4263 TCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 4204 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| || || || || || ||||| ||| Sbjct 4203 TGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTC 4144 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 4143 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 >seq1001 Length=137376 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||||| |||||||||||||| || || | || || | || ||| Sbjct 40993 AGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 40934 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||||||||| || || | || |||||||| Sbjct 40933 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 40874 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| ||| || |||||||| ||||| ||| Sbjct 40873 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 40814 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 40813 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 40782 >seq447 Length=69015 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| || || | ||||| | || || Sbjct 19446 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCC 19505 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || |||||||| || |||| |||||||||||| Sbjct 19506 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC 19565 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||| ||||||| ||| || || |||||||| ||||||||| Sbjct 19566 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 19625 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || ||||| ||||| || Sbjct 19626 TTGCCGGTGAGGGTCTTGAC 19645 >seq923 Length=148606 Score = 156 bits (172), Expect = 1e-32 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||||| || |||||||| || |||| ||| || | || || Sbjct 98100 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 98159 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | |||||||||||| Sbjct 98160 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 98219 Query 211023 TGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||| ||| || || ||| ||||||| ||| || || |||||||| ||||| || Sbjct 98220 TGGAT-TTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGT 98278 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||||| || ||||| || || | |||||| Sbjct 98279 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98311 >seq1256 Length=115194 Score = 89.7 bits (98), Expect = 1e-12 Identities = 192/287 (67%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||||||||| ||| | | | || || ||||| ||||| || | || Sbjct 74740 GTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGT 74799 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | |||||| |||||| | | |||||||| || || ||| || || Sbjct 74800 CTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGC 74859 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 || ||| ||||||||| | |||||| ||||||| || || ||||||||| | Sbjct 74860 ACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGC 74919 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332 ||||||||| |||| |||||| | || ||||| |||| | | ||||| || Sbjct 74920 GAGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTT 74979 Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCTC 178379 |||||| | ||||| | |||| | ||| ||||| | ||| | ||||| Sbjct 74980 CATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCACGGGCTC 75026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159127257176090