Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1377 118 7e-22 seq136 109 4e-19 >seq1377 Length=3727 Score = 118 bits (130), Expect = 7e-22 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 ||| || || || || || || || ||||| ||||| ||||| ||| |||||||| | || Sbjct 3244 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 3185 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || ||||| | || ||||| || || | || || || ||||||||| | | Sbjct 3184 CAATGTCAAGACAAAGA-TTCAGGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCA 3126 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || |||||||| ||||| || |||| ||||| | |||||||||||| || || | Sbjct 3125 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGG 3066 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||| | || || || Sbjct 3065 AGTCCACACTGCACTTGGT 3047 Score = 113 bits (124), Expect = 3e-20 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || || || ||||| ||||| || || || | Sbjct 2571 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 2512 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || || || ||| ||||| || || | || || || || Sbjct 2511 GACACCATTGACAATGTCAAGAC-GAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 2453 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTAC 23787 || || || || || || ||||| || || ||||||| |||| |||| | || ||| Sbjct 2452 GCAACGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCG--GACTAC 2395 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| |||||||| | ||||| || Sbjct 2394 AACATTCAAAAGGAGTCCACTCTTCATTTGGT 2363 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||||||||| || | Sbjct 3027 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAATCATCA 2968 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || || ||||| || || | || || || || Sbjct 2967 GACACGATCGACAATGTCAAGAC-CAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 2909 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || ||||| || || || || |||| || || | ||| ||||| Sbjct 2908 ACAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 2849 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||||||||| || || ||| Sbjct 2848 CATCCAGAAGGAGTCCACATTGCACTTGGTT 2818 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || |||||||| || || || | | Sbjct 2799 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 2740 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || | | ||||| || || | || || || || Sbjct 2739 GACACGATCGACAATGTAAAGACCAAGA-TCCAGGACAAGGAGGGCATTCCTCCGGACCA 2681 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || || |||||||| || |||| || | ||||| | ||||||||| Sbjct 2680 ACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 2621 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 2620 CATCCAGAAGGAGTCCAC 2603 >seq136 Length=82364 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 |||||| || || || || || || ||||| ||||| ||||| || | ||||| |||| Sbjct 3439 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCAGACACCATTGA 3498 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || || || | | ||||| || ||| | || || || |||||||| | | Sbjct 3499 CAATGTCAAGACCAAGA-TCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGCCTCA 3557 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || |||||||| ||||| || |||| ||||| | |||||||||||| ||||| | Sbjct 3558 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGG 3617 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||| | || || || Sbjct 3618 AGTCCACACTGCACTTGGT 3636 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||||||||| || | Sbjct 3656 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 3715 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | || || || || ||||| || || | || || || || Sbjct 3716 GACACCATCGACAACGTCAAGAC-GAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 3774 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || ||||| || ||||| ||||||| || || | ||| ||||| Sbjct 3775 ACAGCGCCTTATTTTCGCCGGAAAGCAACTCGAAGACGGCCGAACCCTCTCCGACTACAA 3834 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || |||||||| | || || ||| Sbjct 3835 CATTCAGAAGGAGTCCACTCTTCACTTGGTT 3865 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| || || || ||||| ||||| || || || | Sbjct 3884 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 3943 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | || || | || || || || ||||| || || | || || || || Sbjct 3944 GACACTATCGACAACGTGAAGAC-GAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 4002 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || |||||||| || || || |||| |||||| | |||||||| Sbjct 4003 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 4062 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | || || ||| Sbjct 4063 CATCCAGAAGGAGTCAACGCTTCACTTGGTT 4093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002736926328