Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1001 152 1e-31 seq1377 143 6e-29 seq447 141 2e-28 seq923 140 8e-28 seq136 140 8e-28 >seq1001 Length=137376 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| |||||||||||||||| ||||| |||| | |||| || ||| Sbjct 40993 AGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 40934 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||||||||| || || || || ||||||||| Sbjct 40933 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 40874 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || ||||| |||| || || || | ||||| ||| Sbjct 40873 TGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 40814 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 40813 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 40782 >seq1377 Length=3727 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| |||||||| || || |||| |||||||||| | || | ||||| Sbjct 2588 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 2647 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || |||||||| | |||||||||||| || ||||| || |||||||| Sbjct 2648 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 2707 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| ||| | ||||| || | ||||| ||| Sbjct 2708 TGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTC 2767 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 2768 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| | ||||| || || |||| ||||| |||| | || Sbjct 2806 ACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 2865 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || ||||||||||| || |||||||| || || || || Sbjct 2866 TCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCC 2925 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| ||| ||||| |||||||| | ||| || || | Sbjct 2926 CTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAG 2985 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 2986 TGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3027 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || |||||||| || ||||| | ||||| || | | || | || ||| Sbjct 2360 AGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCT 2419 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | |||||| ||||| || || || || |||||||| Sbjct 2420 TCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 2479 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| || ||||||||||| | |||||| || | ||||| ||| Sbjct 2480 TGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTC 2539 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 2540 TTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 >seq447 Length=69015 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| |||||||| || || |||| ||||| |||| | || | || || Sbjct 19446 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCC 19505 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || |||||||| || ||||||||||||||||| Sbjct 19506 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC 19565 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || ||||||| ||| || | || || || | ||||||||| Sbjct 19566 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 19625 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 19626 TTGCCGGT 19633 >seq923 Length=148606 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || || |||| ||||| || | | ||| | || || Sbjct 98100 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 98159 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 98160 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCC 98219 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| || || ||||||| ||| || | ||||| || | ||||| ||| Sbjct 98220 TGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 98279 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||| || || | ||| | ||||| Sbjct 98280 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98311 >seq136 Length=82364 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || || ||||| || ||||||| ||||| || | | ||| | || ||| Sbjct 4323 AGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCT 4264 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | |||||||||||| || ||||| || |||||||| Sbjct 4263 TCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 4204 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| |||||||||||||| | || || || | ||||| ||| Sbjct 4203 TGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTC 4144 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 4143 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || ||||| || ||||||| |||||||||| | || | || || Sbjct 3639 AGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 3580 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || |||||||| || || |||||||| || || ||||| |||||||| Sbjct 3579 TCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 3520 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || ||||||||||| | || || || | ||||| ||| Sbjct 3519 TGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGGGTGATGGTC 3460 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||| || Sbjct 3459 TTGCCAGTCAGAGTCTT 3443 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| || || || | ||||| |||| | |||| || ||| Sbjct 3867 AGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 3808 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||| ||||| || |||||||| || ||||| || |||||||| Sbjct 3807 TCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 3748 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||||||||| | ||| || || | ||||| ||| Sbjct 3747 TGGATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCAACTTCGAGTGTGATGGTC 3688 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 3687 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192505744676204