Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq47 104 3e-17 seq1256 84.2 3e-11 >seq47 Length=87938 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 || || ||||| || || ||||| || |||| || || | ||||| || || ||| Sbjct 15522 AAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTG 15581 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||||||||| || ||||| || |||||||| || || | |||||||| || || ||| Sbjct 15582 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 15641 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCGTTG 48314 || || || |||||||| ||||| || || | ||| | | ||| | |||| | Sbjct 15642 AAGATACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTGGAGTCCTCGTCG 15701 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352 | ||||| || | ||||| || ||||| | ||| || Sbjct 15702 TTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGAC 15739 >seq1256 Length=115194 Score = 84.2 bits (92), Expect = 3e-11 Identities = 220/335 (66%), Gaps = 2/335 (1%) Strand=Plus/Plus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || || || || | |||||| | | || ||||| ||| ||| Sbjct 74884 GTAGAGAGCC--TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGG 74941 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||||| ||||| || || | | | ||||| ||||| || | ||||| ||||| Sbjct 74942 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 75001 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 || || || || || |||| || || || || || ||||| | || ||| Sbjct 75002 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 75061 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 || ||||| | | ||||| ||||| || || | || || || | | || || || Sbjct 75062 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 75121 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || |||||||| | || | |||||||| || | || | | ||| || | Sbjct 75122 TTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 75181 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 ||||||||||| || || ||||| | ||| || Sbjct 75182 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTA 75216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694654333522240