Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq136 172 1e-37 seq1377 168 1e-36 seq1001 168 1e-36 seq923 168 1e-36 seq447 136 8e-27 seq1112 96.9 7e-15 >seq136 Length=82364 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| |||| || | ||| || || ||||||||||| |||| Sbjct 4111 ACCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 4052 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || ||||| ||||| | || || ||||| || Sbjct 4051 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGG 3992 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||||||||| || | ||| || Sbjct 3991 AATGCCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCAC 3932 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 3931 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 167 bits (184), Expect = 5e-36 Identities = 167/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | ||| || |||||||||||||| || | Sbjct 3655 ACCACCACGCAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGA 3596 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| ||||| || ||||| ||||| | || |||||||| || Sbjct 3595 AAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGG 3536 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | || || ||||| |||| || || Sbjct 3535 GATACCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAAC 3476 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| ||||| || |||| |||||||||| Sbjct 3475 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 3439 Score = 167 bits (184), Expect = 5e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || |||| ||| | ||| || ||||||||||||||||||| Sbjct 4338 CCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAG 4279 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || || || || ||||| |||||||| ||||||||||| ||| Sbjct 4278 AGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 4219 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| ||||| |||| |||||| Sbjct 4218 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACT 4159 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 4158 TCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| ||||| |||| || | ||| || || || ||||||||||| | Sbjct 3883 ACCACCGCGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 3824 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || ||||| || ||||| || || | || |||||||| || Sbjct 3823 GAGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGG 3764 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||| ||||| || | ||| || Sbjct 3763 AATGCCCTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCGATGGTGTCTGATGATTCAAC 3704 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 3703 TTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 >seq1377 Length=3727 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || |||| || || ||| || || |||||||||||||| | Sbjct 2800 ACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 2859 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || || || ||||| ||||| | || |||||||| || Sbjct 2860 GAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGG 2919 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| | || || | ||||| ||||| || | ||| || Sbjct 2920 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAAC 2979 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 2980 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3027 Score = 168 bits (186), Expect = 1e-36 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || |||| || | ||| || || ||||||||||| || | | Sbjct 3029 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAA 3088 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| ||||| || ||||| ||||| | ||| |||||||| || Sbjct 3089 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 3148 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||||| || || | |||||||||||||| | || || Sbjct 3149 ATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACC 3208 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| ||||| || |||| |||||| ||| Sbjct 3209 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 3244 Score = 167 bits (184), Expect = 5e-36 Identities = 176/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || | ||| || || ||||||||||| || | Sbjct 2572 ACCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGA 2631 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| | || || ||||| |||||||| ||||||||||| || Sbjct 2632 AAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 2691 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 ||| ||||||||||| |||||||| | ||||| | ||||| |||| || |||| || | Sbjct 2692 AATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGT-CGGAGCTCTCCA 2750 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 2751 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| ||| | ||| || ||||| ||||||||||| | | Sbjct 2345 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 2404 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || || || || || |||||||| ||||| ||||| || Sbjct 2405 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGG 2464 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | || || ||||| || | ||| || Sbjct 2465 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACC 2524 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 2525 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 >seq1001 Length=137376 Score = 168 bits (186), Expect = 1e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | ||| ||||||||||||||||||||| | Sbjct 41009 ACCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGA 40950 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||| || || || || || ||||| ||||| | |||||||||||| || Sbjct 40949 TAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGG 40890 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||||| | || ||| | || || ||||| || | || || Sbjct 40889 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTAC 40830 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATAT 283107 ||||| ||||| ||||| || || | ||||| ||||| |||||||| | |||| Sbjct 40829 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATGATGATAT 40774 >seq923 Length=148606 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||||||||| || || || | || || || |||||||||||||| | Sbjct 98084 ACCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 98143 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || ||||| ||||| | || || ||||| || Sbjct 98144 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGG 98203 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||| ||||| || | || |||| ||||| | ||| |||| || || Sbjct 98204 GATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCAC 98263 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||||||||||| ||||| ||||| |||||||| Sbjct 98264 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98311 >seq447 Length=69015 Score = 136 bits (150), Expect = 8e-27 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| | || ||||| || ||||| || || || ||||| ||| Sbjct 19467 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 19526 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| |||||||| |||||||| |||||||| |||||||| | || |||| Sbjct 19527 ATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACGGCG 19586 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| | ||| || | ||||| ||||| ||||||||||| || || | ||||| ||| Sbjct 19587 TCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTGACG 19646 >seq1112 Length=124996 Score = 96.9 bits (106), Expect = 7e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | |||||||||| ||| || | ||| || || |||||||| | ||| Sbjct 23643 GGGAAACCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCG 23584 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||| |||| || ||||| || || | || ||| || | | || | |||| ||| Sbjct 23583 TTGCGGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGA 23524 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| |||| || || |||||||||| ||| | |||| |||||| || Sbjct 23523 AGAATCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 23471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046716856697564