Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001645015.1_202016-05-16] 1,666 sequences; 30,384,772 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq136 152 5e-32 seq923 149 6e-31 seq447 145 7e-30 seq1377 140 3e-28 seq1001 127 2e-24 >seq136 Length=82364 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || ||||| ||||||||| ||||| || || || Sbjct 4110 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 4051 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||||||||| || |||||||| ||||||| ||| Sbjct 4050 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 3991 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | |||||| || ||||| Sbjct 3990 ATGCCCTCCTTGTCCTGGATCTTCGTCTTC-ACGTTGTCGATAGTGTCTGATGATTCCAC 3932 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| |||||||||||||| Sbjct 3931 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3884 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || ||| ||||||||||||||| ||||||||| Sbjct 3882 CCACCGCGCAGACGAAGAACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 3823 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||| ||||| |||||||| || |||||||||||||||| ||| Sbjct 3822 AGGGTTCGGCCGTCTTCGAGTTGCTTTCCGGCGAAAATAAGGCGCTGTTGGTCCGGAGGA 3763 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| || || || Sbjct 3762 ATGCCCTCCTTGTCCTGGATCTTCGTCTT-GACGTTGTCGATGGTGTCTGATGATTCAAC 3704 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||| ||||| |||||||| Sbjct 3703 TTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 3656 Score = 140 bits (154), Expect = 3e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | |||| ||| || ||| |||||| || ||||| ||||| || Sbjct 4339 GCCACCGCGGAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGA 4280 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || || |||| |||||||||||||||||||| |||| || |||||||||| || Sbjct 4279 GAGAGTACGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 4220 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 || || |||||||||| ||| | || | |||| || | | | ||||| ||||| Sbjct 4219 AATGCCCTCCTTGTCC-TGAATCTTGGTCTTC-ACATTGTCGATGGTGTCTGAAGACTCG 4162 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || || || || || || ||||| ||||| |||||||| Sbjct 4161 ACTTCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 4112 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| ||| |||||| || ||||| || ||||| Sbjct 3654 CCACCACGCAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 3595 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| |||||||||||||| || |||||||||||||||| || Sbjct 3594 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGAGGG 3535 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| || | | | ||||| ||||| || Sbjct 3534 ATACCCTCCTTGTCCTGGATCTTGGTCTT-GACATTGTCAATGGTGTCTGAAGACTCAAC 3476 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 ||| | || || || || || ||||| ||||| ||| Sbjct 3475 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 3439 >seq923 Length=148606 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || || ||||||||| ||||| ||||| || Sbjct 98085 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 98144 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||||||||| || || ||||| ||||||| ||| Sbjct 98145 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 98204 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| |||||| ||| ||| || | | | |||| |||||||| Sbjct 98205 ATACCTTCCTTGTCCTGGATTTTGGTCTT-GACGGCGTCGATGGAGTCGGAAGACTCCAC 98263 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || ||||||||||| ||||| ||||| ||||||||| Sbjct 98264 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATG 98312 >seq447 Length=69015 Score = 145 bits (160), Expect = 7e-30 Identities = 153/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| ||||||||||||||||| |||| ||| Sbjct 19449 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCG 19508 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || ||||||||||||| ||||| | ||||||||| | Sbjct 19509 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGG 19568 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| ||| || | | | |||| |||||| ||||| | || ||||| || Sbjct 19569 ATCTTGGTCTT-GACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTT 19627 Query 41833 ACCCGTCAGCGTCTTTACG 41851 || || || ||||| ||| Sbjct 19628 GCCGGTGAGGGTCTTGACG 19646 >seq1377 Length=3727 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || ||| |||||| |||||||| ||||| || Sbjct 2344 GCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 2403 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| |||||||||||||| ||||| |||| || || ||||||| ||| Sbjct 2404 AAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGG 2463 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | | || | | | ||||| || |||| Sbjct 2464 GATGCCCTCCTTGTCC-TGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCA 2522 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| |||||||||||||| Sbjct 2523 CCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 2571 Score = 136 bits (150), Expect = 4e-27 Identities = 165/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||| ||||| ||| ||||||||| ||||| || ||||| Sbjct 3028 GCCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGA 3087 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| ||||| |||||||||||||| || || ||||||||||||| || Sbjct 3088 AAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGG 3147 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811 | || |||||||||| ||| | |||| ||| || | || | |||||| ||||| Sbjct 3148 GATGCCCTCCTTGTCC-TGAATCTTTGTCTTGACATTGTCG--ATAGTGTCCGAGGACTC 3204 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 ||||| | || || || || || ||||| ||||| ||| Sbjct 3205 AACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 3244 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || ||| ||||||||| ||||| || ||||| Sbjct 2573 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 2632 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | ||||||||||||||| |||| || |||||||||| ||| Sbjct 2633 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 2692 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | |||||| ||||| Sbjct 2693 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCG--ATCGTGTCGGAGCTCTCCA 2750 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| |||||||| Sbjct 2751 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2799 Score = 131 bits (144), Expect = 2e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||| |||| ||| ||||||||| ||||| ||||||||| Sbjct 2801 CCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2860 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||||||||| |||||||| || |||||||||||||||| || Sbjct 2861 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 2920 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| || ||| || | || | ||||| || || | Sbjct 2921 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCG--ATCGTGTCTGATGATTCAA 2978 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || || || || || || || ||||| ||||| ||||||||| Sbjct 2979 CTTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 3028 >seq1001 Length=137376 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || ||| || || || ||||| |||||||| Sbjct 41008 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 40949 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| |||||||||||||||||||| || || || |||||||| | ||| Sbjct 40948 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 40889 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||| ||| | | | |||||| ||||| || Sbjct 40888 ATGCCCTCCTTGTCTTGGATCTTGGTCTT-GACGTTGTCAATCGTGTCGGAGGACTCTAC 40830 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 40829 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATG 40781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462294372519200