Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq261 96.9 7e-15 seq47 93.3 9e-14 >seq261 Length=24592 Score = 96.9 bits (106), Expect = 7e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 319804 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 319861 || || || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 12969 TCAGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 13026 Query 319862 ACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTG 319921 | || || | ||| |||||| ||| |||||||| ||||| || || || | ||||| Sbjct 13027 AGCCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTAC 13086 Query 319922 GCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAA 319981 | ||||| |||||||| |||| || || || ||| || | | |||| ||||||| Sbjct 13087 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 13146 Query 319982 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 13147 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 13195 >seq47 Length=84389 Score = 93.3 bits (102), Expect = 9e-14 Identities = 282/428 (66%), Gaps = 7/428 (2%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 ||||||||||| || || |||| | || || ||||| | || ||||| |||| Sbjct 59045 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTC 59104 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | ||||||| ||||| ||| ||| | ||||| || ||| | || |||||| Sbjct 59105 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 59164 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA--AGC 230350 ||||||| || ||||||||||| || || | | || |||| | |||| | | Sbjct 59165 CTCATCAGCCGAGACGAGGGTCTGCA-CACCGACTTTGCTTGCTTGC-TCTTCAGCCACC 59222 Query 230351 TCCAGAACAAGCTACCATTCGA-GACGGTCAAACAAATCATTACAGAAGCAGTTGAAAAC 230409 || |||| || | ||| | || || | |||||| | || | || | Sbjct 59223 TCAAGAAGCGGCCGCACCCCGATGTCGTTCTG-CGCATCATTGCCGAGTCTGTCACCATT 59281 Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTT 230469 || ||| ||| | || ||| |||| ||| | || ||||||||||| |||| Sbjct 59282 GAGCAGGCTTTCCTGACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTT 59341 Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | |||||||||||||| || || || || | | || || || || ||||||| Sbjct 59342 ATGAGCCAGTACATCGAATTTGTCGCTGA-CGACTGCTGGTAGCCCTCGGGAACGAGAAG 59400 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 |||||| | | || ||||| | || |||||| ||| ||||| ||||| ||||| Sbjct 59401 CACTACAACGCCACAAATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACA 59460 Query 230590 AACTTCTT 230597 |||||||| Sbjct 59461 AACTTCTT 59468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817629916100