Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq47 217 2e-51 seq16 149 6e-31 seq111 138 1e-27 seq418 134 1e-26 seq136 122 9e-23 >seq47 Length=84389 Score = 217 bits (240), Expect = 2e-51 Identities = 340/480 (71%), Gaps = 5/480 (1%) Strand=Plus/Plus Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 |||| || ||||| || || |||||| | |||||||||||||| |||||||||||| Sbjct 58968 ACGCGATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCA 59027 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 || | ||| || |||| | |||||||||||| ||||| || ||||| ||||| ||| Sbjct 59028 ACGACGAAGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCT 59087 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || ||| ||||||| |||| || ||||||||||| || || ||||||||||| | Sbjct 59088 TCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTC 59147 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 | || ||| ||||||||||||| | | |||||||||||||| ||||||||| || | Sbjct 59148 TCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCT 59207 Query 117192 TGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 |||| |||| || | | |||| ||| | | | ||| | ||| | ||| Sbjct 59208 TGCTCTTCAGCCACCTCAAGAAGCGGCCGCACCCCGATGTCGTTCTGCGCATCATTGCCG 59267 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC-TGCCGGTGCGTCTGCTGGGA 117310 | | ||| |||| |||||| ||||| ||||| || | | || || | | || | || Sbjct 59268 AGTCTGTCACCATTGAGCAGGCTTTCCTGACCGATGCTCTTCCCTGTTCAT-TGATCGGC 59326 Query 117311 CTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGA 117369 | || || || ||| || |||||||| || ||||| ||| | |||||| | | Sbjct 59327 ATGAA-CGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGAC-GACTGCTGGTAGC 59384 Query 117370 GCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | || |||||||||||| | | || || | ||||| ||| | |||||| Sbjct 59385 CCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAACATCTC 59444 Score = 208 bits (230), Expect = 8e-49 Identities = 189/235 (80%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||| | ||||||| | ||||| Sbjct 58573 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 58632 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||||| | ||||||||||||||||| || ||||||| Sbjct 58633 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 58692 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| || ||||||||||||||||| || |||||||| Sbjct 58693 CACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCGG 58752 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| ||||| ||||| |||| || ||||| || |||||||||||||| || ||| Sbjct 58753 TTCAGCTCA-GAGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 58806 >seq16 Length=163030 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| || || || || Sbjct 133466 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTTGAGTCCTCC 133525 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||||||||| ||||||| Sbjct 133526 GACACTATCGACAACG-TCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCA 133584 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| ||||| ||||| || |||| || |||||| |||||||| Sbjct 133585 ACAACGATTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACCCTCTCGGACTACAA 133644 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| ||||| | || | ||| || | || ||| Sbjct 133645 CATCCAGAAGGAGTCCACATTGCATTTGGTTCTCCGCCTGCGTGGTGGC 133693 Score = 143 bits (158), Expect = 3e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 128114 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 128055 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| |||||||||||| |||||||| Sbjct 128054 GACACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 127995 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||||||||| ||||| || || | |||||||| ||||||||| Sbjct 127994 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCGGACTACAAC 127935 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 || || |||||| |||| || ||| Sbjct 127934 ATTCAAAAGGAGTCCACTCTTCAT 127911 Score = 136 bits (150), Expect = 4e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| ||||| | || Sbjct 128342 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCC 128283 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||| || ||||||| Sbjct 128282 GACACCATTGATAACG-TCAAGACGAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 128224 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||| ||||| ||| |||| || | |||||||| ||| ||||| Sbjct 128223 ACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 128164 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| || || Sbjct 128163 CATCCAGAAGGAGTCCACTCTTCA 128140 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || || | |||| | | | Sbjct 133249 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 133308 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| ||||||||||| ||||||| || || ||||| Sbjct 133309 CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCAT 133368 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| || || || |||| |||||||| ||| ||||||||||||||||| Sbjct 133369 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAGAAGGA 133428 Query 40881 GGCCACGCTGCA 40892 | |||| ||||| Sbjct 133429 GTCCACACTGCA 133440 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| ||||| || | Sbjct 128570 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 128511 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||||||||| |||| || Sbjct 128510 GACACTATCGACAACG-TCAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCGGATCA 128452 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| ||| ||||| |||||||| |||| || || | |||||||| Sbjct 128451 GCAGCGATTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGAACATTGTCGGACTACAA 128392 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||| || |||||| | || ||||| Sbjct 128391 CATTCAAAAGGAGTCAACTCTGCA 128368 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || || ||| | | Sbjct 128798 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 128739 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || || | ||||| ||||| |||||| ||||||| Sbjct 128738 GACACCATCGACAACG-TGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 128680 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||| |||| || | ||||| || || ||||| Sbjct 128679 GCAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAA 128620 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 128619 CATCCAGAAGGAGTCAACGCTTCA 128596 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || || ||| | | Sbjct 133694 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAATCATCA 133753 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || || | ||||| ||||| |||||| ||||||| Sbjct 133754 GACACCATCGACAACG-TGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 133812 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||| |||| || | ||||| || || ||||| Sbjct 133813 GCAGCGCCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACTCTTTCTGATTACAA 133872 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | ||||| || Sbjct 133873 CATCCAGAAGGAGTCAACGCTTCA 133896 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| ||||| || | Sbjct 133922 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAAGTCGAGTCCTCA 133981 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| ||||| || || |||| || Sbjct 133982 GACACTATCGACAACG-TCAAGACCAAGATTCAAGACAAGGAGGGTATTCCTCCGGATCA 134040 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||||||||| ||| |||| || | |||||||| |||||||| Sbjct 134041 ACAGCGATTGATCTTCGCGGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGACTACAA 134100 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 |||||| || ||| |||| || ||| Sbjct 134101 CATCCAAAAAGAGTCCACACTTCAT 134125 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || || | |||| | | | Sbjct 129015 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATTGA 128956 Query 40761 -AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819 |||| ||||| ||| || | || || |||||||| || |||||||||| || |||| Sbjct 128955 CAACG-TCAAGACAAAGATCCAAGATAAGGAGGGCATTCCTCCGGACCAGCAGCGCCTCA 128897 Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879 ||| || ||||| ||||| || |||| || || | ||||||||||||||||||| Sbjct 128896 TCTTTGCCGGCAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGG 128837 Query 40880 AGGCCACGCTGCA 40892 || |||| |||| Sbjct 128836 AGTCCACATTGCA 128824 >seq111 Length=618870 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| || || || || Sbjct 410616 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 410675 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 410676 GACACGATTGACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 410734 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 410735 ACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAA 410794 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || || |||| || || || || Sbjct 410795 CATCCAAAAAGAATCCACCCTCCACCTCGT 410824 >seq418 Length=175290 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || |||||| |||| || || | || Sbjct 55082 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 55023 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | ||||| ||||| | ||||| || || |||||| |||||||| Sbjct 55022 GACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCAG 54963 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 54962 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAAC 54903 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || ||| | ||| || | || || Sbjct 54902 ATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCGCCTGCGTGGTGG 54856 >seq136 Length=51868 Score = 122 bits (134), Expect = 9e-23 Identities = 143/192 (74%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || ||||| ||||| || |||||| |||| ||||| | ||||| | | | Sbjct 49392 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 49451 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| || || || ||| ||||||| || || ||||| Sbjct 49452 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCC-CGGACCAACAGCGTCTCAT 49510 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| ||||| || |||| ||||| ||| ||||||||||||||||||||| Sbjct 49511 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGA 49570 Query 40881 GGCCACGCTGCA 40892 | |||| || || Sbjct 49571 GTCCACTCTTCA 49582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216173087200