Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq16 134 1e-26 seq111 104 2e-17 seq136 102 7e-17 seq418 100 2e-16 >seq16 Length=163030 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||||||| | ||||| |||||| Sbjct 133446 ACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 133387 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| ||||||||||||| || || ||||| ||||||||||||||| Sbjct 133386 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 133327 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| | ||| ||||||| ||| | || ||| Sbjct 133326 ATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 133267 Query 118710 CCGGTCAGAGTTTTTAC 118726 || |||||||| || || Sbjct 133266 CCAGTCAGAGTCTTAAC 133250 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||| || || || || |||||| Sbjct 128818 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCG 128877 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || ||||||| |||||||| || ||||| ||||||||||| ||| Sbjct 128878 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 128937 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | || | |||||||| | ||| ||||||| ||| | || ||| Sbjct 128938 ATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 128997 Query 118710 CCGGTCAGAGTTTTTAC 118726 || |||||||| || || Sbjct 128998 CCAGTCAGAGTCTTGAC 129014 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| |||||||||||||| || || || || ||||| Sbjct 128362 ACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCCTCC 128421 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | ||||||||||| ||||| |||||||||||||| | Sbjct 128422 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGA 128481 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | | |||||| |||| || | || ||| Sbjct 128482 ATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTG 128541 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 128542 CCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||||||| | ||||| |||||| Sbjct 128134 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 128193 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| || || ||| |||| | || || || || ||||| ||||||||||||||| Sbjct 128194 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 128253 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||||||||| |||| || | || ||| Sbjct 128254 ATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACTTCGAGAGTGATAGTCTTG 128313 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 128314 CCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||| ||||||||||| |||||||| || | ||||| |||||| Sbjct 134130 ACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCC 134071 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| || || ||| |||| | ||||| ||||| ||||| || |||||||||||| | Sbjct 134070 AACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCTTGA 134011 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | | |||||| |||| || | || ||| Sbjct 134010 ATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTG 133951 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 133950 CCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| |||||||||||||| || | ||||| ||| ||| Sbjct 127906 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCG 127965 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | |||||||| || || || |||||||||||||| | Sbjct 127966 AGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 128025 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||| | || | || ||||||| || | || || Sbjct 128026 ATCTTCGTCTTGACATTGTCGATGGTGTCTGATGAT-TCCACCTCGAGTGTGATGGTCTT 128084 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || ||||||||||| Sbjct 128085 GCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 109 bits (120), Expect = 5e-19 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||||||||| | |||||| |||||| Sbjct 128590 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 128649 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| |||| || |||||||| || || || || |||||||||| ||| Sbjct 128650 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 128709 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 | | || || || || | |||| |||||| | || | || ||||| | || | || Sbjct 128710 A--TCTTCGTCTTCACGTTGTCGATGGTGTCTGATGAT-TCCACCTCAAGAGTGATGGTC 128766 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| ||||| || || || |||||||| Sbjct 128767 TTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 105 bits (116), Expect = 6e-18 Identities = 155/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || ||||||||||| | |||||| |||||| Sbjct 133902 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCC 133843 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| |||| || |||||||| || || || || |||||||||| ||| Sbjct 133842 AACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 133783 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTT 118706 | | || || || || | |||| |||||| | || | || ||||| | || | || Sbjct 133782 A--TCTTCGTCTTCACGTTGTCGATGGTGTCTGATGAT-TCCACCTCAAGAGTGATGGTC 133726 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||||||| || || || || || ||||||||| Sbjct 133725 TTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 133693 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||| ||||| || || |||||||| || | || || || || Sbjct 133674 ACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCTTCA 133615 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | || || || || ||||| |||||||||||||| | Sbjct 133614 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 133555 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||||| | | ||| || |||| || | || ||| Sbjct 133554 ATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTCTTG 133495 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||| || || || || || ||||||||| Sbjct 133494 CCGGTGAGGGTCTTGACGAAGATCTGCATG 133465 >seq111 Length=618870 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || |||||||| |||||||| ||| | || || || |||||||| Sbjct 410819 GTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTG 410760 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||| || || || || || ||||||||||||||| || || Sbjct 410759 CTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTT 410700 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||||| | | ||| ||||||| ||| | || ||||| || Sbjct 410699 GGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCAGT 410640 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||||||| Sbjct 410639 AAGGGTCTTGACGAAGATCTGCATG 410615 >seq136 Length=51868 Score = 102 bits (112), Expect = 7e-17 Identities = 145/199 (73%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| | |||||| |||||| Sbjct 49588 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 49529 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 ||||| || || ||| ||||||||||||| || || || || || || ||||||| ||| Sbjct 49528 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGG-GGAATACCTTCCTTGTCCTGG 49470 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | | || || || || |||| || ||| | ||||||||||| ||| | ||| | Sbjct 49469 A--TCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCT 49412 Query 118708 TGCCGGTCAGAGTTTTTAC 118726 ||||||| || || || || Sbjct 49411 TGCCGGTGAGGGTCTTGAC 49393 >seq418 Length=175290 Score = 100 bits (110), Expect = 2e-16 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||| || | ||| || ||||| Sbjct 54873 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 54932 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||| || || ||| ||||||| |||||||| || || || || || ||||||| ||| Sbjct 54933 GAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 54992 Query 118648 TAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 | |||| || || || |||| || ||| | ||| ||||||| ||| | || Sbjct 54993 GA--TTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 55050 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || ||||| || || || || ||||||||| Sbjct 55051 TTACCCGTCAGGGTCTTGACGAAGATCTGCATG 55083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827914965240