Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 2e-11 >seq16 Length=163030 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || ||||| || ||||||||||||||||| | || |||| | || Sbjct 128359 AGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCC 128418 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| || |||| | || || |||||| || | ||| ||||| || Sbjct 128419 TCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 128478 Query 18234 GCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||| ||| | |||||| | | | |||||| || |||| ||| | ||||| | Sbjct 128479 TGAATCTTGGT-CTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGT 128537 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| | || || || || || ||||| Sbjct 128538 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||||| || |||||||| ||||||||||| | | || | ||| Sbjct 134133 AGGACCAAATGAAGTGTGGACTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 134074 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 ||||| || |||||||| |||| | || ||||||||| || | || ||||| || Sbjct 134073 TCCAACTGCTTGCCCGCGAAGATCAATCGCTGTTGATCCGGAGGAATACCCTCCTTGTCT 134014 Query 18234 GCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||| ||| | |||||| | | | |||||| || |||| ||| | ||||| | Sbjct 134013 TGAATCTTGGT-CTTGACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGT 133955 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||| | || || || || || ||||| Sbjct 133954 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341827070150