Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq47 138 2e-27 seq22 118 2e-21 >seq47 Length=84389 Score = 138 bits (152), Expect = 2e-27 Identities = 126/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||||||||||||||||| || || || |||||||| || || Sbjct 59209 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 59150 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| |||||||| || |||||||| || ||||| || ||||| || || || || || || Sbjct 59149 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 59090 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTC 50114 |||||| || ||||| || ||||||||||| || | ||| Sbjct 59089 GAAGATACCCTCTACGGCAGCAAAGGCAACCAGGCGCTC 59051 >seq22 Length=350823 Score = 118 bits (130), Expect = 2e-21 Identities = 217/317 (68%), Gaps = 1/317 (0%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | | || || || || | || ||||||| |||| Sbjct 66425 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGAC 66484 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 |||||||| | | | ||||| ||||| || | ||||| |||||||| || || Sbjct 66485 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 66544 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | || || |||||| || || ||||| | || ||||||||| | | Sbjct 66545 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 66604 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT-CCTCC 80099 | ||||| ||||| || || | ||| ||||| | | || || || |||||| || || Sbjct 66605 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTTGCCACC 66664 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 |||||| | ||| | ||||||||| || | || | | ||| || | ||||| || || Sbjct 66665 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 66724 Query 80160 TGTACCATTGGTCCCGG 80176 ||| || || |||| Sbjct 66725 GACACCGTTAGTTCCGG 66741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264580170800