Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16 98.7 2e-15 seq418 91.5 3e-13 >seq16 Length=163030 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || | ||| ||||| || || ||||| || || ||||| || || || | |||||| Sbjct 133677 AGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGTCCGTCT 133618 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || || || | | ||||| || ||||| || || || || ||| Sbjct 133617 TCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 133558 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | || ||| | || || || ||||| || ||| Sbjct 133557 TGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAACTTCGAGTGTGATTGTC 133498 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || |||||||| Sbjct 133497 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 133466 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| || || || | || ||||| || || || || Sbjct 127918 GTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCC 127977 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| || || || || || || || || ||||||||||| | || Sbjct 127978 GCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTG 128037 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | ||| ||||| ||||| || ||||| || || || || Sbjct 128038 ACATTGTCGATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTC 128097 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 128098 TTGACGAAAATCTGCAT 128114 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| || | |||| ||||| || || || || || Sbjct 128374 GTTGACTCCTTTTGAATGTTGTAGTCCGACAATGTTCGGCCGTCCTCCAGCTGCTTGCCG 128433 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| ||||| ||||| || || || || ||||||||||| | || Sbjct 128434 GCGAAGATCAATCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTG 128493 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || || | || || || ||||| || ||||| || || || || Sbjct 128494 ACGTTGTCGATAGTGTCTGAGGACTCGACTTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 128553 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 128554 TTGACGAAGATCTGCAT 128570 >seq418 Length=175290 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| || ||||| | ||||| Sbjct 54870 AAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTC 54929 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || || || || | ||| || || || || || ||||| || || Sbjct 54930 CTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGGATACCTTCCTTGTC 54989 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| || || | || || || | || ||| || || ||||| || || ||||| Sbjct 54990 CTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGT 55049 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||| || || || || || || |||||||| Sbjct 55050 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 55082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151391466422760