Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689945.1_202016-07-20] 470 sequences; 37,216,861 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq16 134 1e-26 seq418 127 2e-24 seq111 107 2e-18 seq136 98.7 9e-16 >seq16 Length=163030 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || || || | || |||||||||||||||||||| || | Sbjct 128344 CCACCACGCAGGCGGAGAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTGTAGTCCGAC 128403 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| || |||||||| ||||||||| Sbjct 128404 AATGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGATCCGGAGGG 128463 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||| || | |||||||| Sbjct 128464 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCTGAGGACTCGACT 128523 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 128524 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128570 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | || |||||||||||||||||||| || Sbjct 127887 GCCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 127946 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| ||| |||| || |||||||||||||| || Sbjct 127947 AAGGGTGCGGCCATCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCCGGGGG 128006 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | || || | || || | Sbjct 128007 GATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCAC 128066 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || || || |||||||||||||| Sbjct 128067 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 128114 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || || || | || |||||||| || |||||||||||| Sbjct 128116 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 128175 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | ||||||||| ||| |||| || || || ||||||||||| Sbjct 128176 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 128235 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || |||| | ||||| Sbjct 128236 ATGCCCTCCTTGTCTTGGATCTTCGTCTTGACGTTATCAATGGTGTCGGAGCTCTCGACT 128295 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 128296 TCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 128342 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || || || || || | || |||||||| || |||||||||||| Sbjct 133465 GCCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTCTGGATGTTGTAATCGGA 133406 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| || |||||||| ||| |||| | |||||| ||||||||||| Sbjct 133405 AAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGG 133346 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || || | |||||| | Sbjct 133345 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAAC 133286 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 |||| ||| | ||| || || || ||||| || ||| Sbjct 133285 CTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 133249 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || || || ||||| | || |||||||| || |||||||| || Sbjct 133693 GCCACCACGCAGGCGGAGAACCAAATGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGA 133634 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||| || ||||||||||| ||| |||| || || || ||||||||||| Sbjct 133633 GAGGGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGG 133574 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | ||| |||| |||||| | Sbjct 133573 GATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGACTCAAC 133514 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | || || ||||| || || || ||||| ||||||||| Sbjct 133513 TTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 133465 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | || |||||||| || ||||||||||| Sbjct 128572 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 128631 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | ||||||||| ||| |||| | |||||||||||||| ||| Sbjct 128632 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 128691 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | || || | Sbjct 128692 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACC 128751 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| || ||||| |||||||| Sbjct 128752 TCAAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 128798 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | || |||||||| || ||||||||||| Sbjct 133920 CCACCGCGCAGACGAAGAACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 133861 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | ||||||||| ||| |||| | |||||||||||||| ||| Sbjct 133860 AGAGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 133801 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | || || | Sbjct 133800 ATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCCACC 133741 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| || || || ||||| ||||||||| Sbjct 133740 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 133693 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || || || | || |||||||| || |||||||| || | Sbjct 128800 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCCGAC 128859 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| || |||| | ||||||||||||||||| Sbjct 128860 AATGTTCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGA 128919 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | || || | |||||| | Sbjct 128920 ATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCCGAGGACTCAACC 128979 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 |||| ||| | ||| || || || ||||| || ||| Sbjct 128980 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 129015 >seq418 Length=175290 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| || |||||||| || Sbjct 54856 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 54915 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | |||||||||||||| ||| Sbjct 54916 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGG 54975 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| |||||| ||||| | || || | | |||| ||||| | Sbjct 54976 ATACCTTCCTTGTCCTGGATTTTGGTCTTGA-CGGCGTCGATGGAGTCGGAAGACTCCAC 55034 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || ||||| || || || || ||||| ||||||||| Sbjct 55035 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATG 55083 >seq111 Length=618870 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| || || ||||| |||||||| ||| Sbjct 410842 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 410783 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || ||||||||||| ||| |||| | ||| || ||||| || ||| Sbjct 410782 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 410723 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||| | Sbjct 410722 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 410663 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| ||| | ||| || || || || || || ||||| |||||||||| Sbjct 410662 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATGA 410614 >seq136 Length=51868 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/205 (72%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | || |||||||| || |||||||| ||| | ||||| | Sbjct 49594 CGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCG 49535 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | |||||| |||||||| || || ||||| ||| Sbjct 49534 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGG-GGAATACCTTCCTTG 49476 Query 131140 TCGGTGATTTTCTGCTTGAGCTGC-TCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || ||| || ||||| | || || | | |||| ||||||| |||| ||| | Sbjct 49475 TCCTGGATCTTGGTCTTGA-CGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGAT 49417 Query 131199 GGTTTTACCGGTTAGAGTTTTTACG 131223 || || ||||| || || || ||| Sbjct 49416 CGTCTTGCCGGTGAGGGTCTTGACG 49392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010026924800